Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of SO3627 in Shewanella sediminis HAW-EB3

Properties
Regulator type: Transcription factor
TF locus tag: Ssed_4177
Regulator family: TetR
Regulation mode: repressor
Biological process:
Effector:
Regulog: SO3627 - Shewanellaceae
Statistics of regulated genes:
- Genes 5
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 4 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -96
Score: 7
Sequence: TTTTTGTGGTGTACCTCAAGAA
Locus tag: Ssed_4177
Name: SO3627
Funciton: Transcriptional regulator, TetR family
SO3627
Transcriptional regulator, TetR family

Position: -113
Score: 7
Sequence: TTCTTGAGGTACACCACAAAAA
Locus tag: Ssed_4178
Name: SO3624
Funciton: Flavocytochrome c flavin subunit
Locus tag: Ssed_4179
Name: null
Funciton: Flavocytochrome c heme subunit
Locus tag: Ssed_4180
Name: SO3622
Funciton: conserved domain protein
Locus tag: Ssed_4181
Name: SO3621
Funciton: conserved hypothetical protein lipoprotein
SO3624
Flavocytochrome c flavin subunit
Flavocytochrome c heme subunit
SO3622
conserved domain protein
SO3621
conserved hypothetical protein lipoprotein
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD