Regulon of HcpR in Geobacter sulfurreducens PCA

Properties
Regulator type:	Transcription factor
TF locus tag:	GSU3421
Regulator family:	CRP
Regulation mode:	activator
Biological process:	Nitrosative stress response
Effector:	Nitric oxide
Regulog:	HcpR - Desulfuromonadales
Statistics of regulated genes:
- Genes	12
- Operons	7
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 44 sites [see more]

Member of regulog collections

By taxonomy - Desulfuromonadales
By trascription factor - HcpR
By TF family - CRP
By effector - Nitric oxide
By pathway - Nitrosative stress response

Regulated operons
	Locus Tag	Name	Function
Position: -143 Score: 5.5 Sequence: CCTTGACCCACGTCAAGG Locus tag: GSU0674 Name: hcp Funciton: Hydroxylamine reductase (EC 1.7.-.-)
	GSU0674	hcp	Hydroxylamine reductase (EC 1.7.-.-)
Position: -77 Score: 5 Sequence: TCTTGACCCACATCATAA Locus tag: GSU2659 Name: SSF140683 Funciton: SP0561-like superfamily hypothetical protein Locus tag: GSU2660 Name: frdX2 Funciton: Ferredoxin fused to uncharacterized domain Locus tag: GSU2661 Name: COG3945 Funciton: Hemerythrin HHE cation binding domain hypothetical protein
	GSU2659	SSF140683	SP0561-like superfamily hypothetical protein
	GSU2660	frdX2	Ferredoxin fused to uncharacterized domain
	GSU2661	COG3945	Hemerythrin HHE cation binding domain hypothetical protein
Position: -51 Score: 5.3 Sequence: TTTTGACCTGCGTCATGA Locus tag: GSU3248 Name: ygbA Funciton: hypothetical protein involved in nitrosative stress Locus tag: GSU3247 Name: frdX1 Funciton: Ferredoxin fused to uncharacterized domain
	GSU3248	ygbA	hypothetical protein involved in nitrosative stress
	GSU3247	frdX1	Ferredoxin fused to uncharacterized domain
Position: -75 Score: 5.2 Sequence: GCTTGACCTGTGTCAAGG Locus tag: GSU0493 Name: ndh Funciton: NADH dehydrogenase (EC 1.6.99.3) Locus tag: GSU0494 Name: COG2006 Funciton: Iron-sulfur cluster-binding protein
	GSU0493	ndh	NADH dehydrogenase (EC 1.6.99.3)
	GSU0494	COG2006	Iron-sulfur cluster-binding protein
Position: -295 Score: 5.3 Sequence: CCTTGACCTGCATCAAGG Position: -78 Score: 4.9 Sequence: CCTTGACTCCCGTCAATG Locus tag: GSU0224 Name: COG1917 Funciton: hypothetical protein
	GSU0224	COG1917	hypothetical protein
Position: -39 Score: 5.2 Sequence: CTTTGACTTACGTCAAAC Locus tag: GSU0105 Name: PF02085 Funciton: cytochrome c family protein, putative
	GSU0105	PF02085	cytochrome c family protein, putative
Position: -165 Score: 4.7 Sequence: TGTTGACTTGAGTCAAAC Locus tag: GSU3155 Name: nrfH Funciton: Cytochrome c nitrite reductase, small subunit NrfH Locus tag: GSU3154 Name: nrfA Funciton: Cytochrome c552 precursor (EC 1.7.2.2)
	GSU3155	nrfH	Cytochrome c nitrite reductase, small subunit NrfH
	GSU3154	nrfA	Cytochrome c552 precursor (EC 1.7.2.2)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD