Regulon of DtxR in Clostridium nexile DSM 1787
| Regulator type: | Transcription factor |
| TF locus tag: | CLONEX_03800, CLONEX_00478 |
| Regulator family: | DtxR |
| Regulation mode: | repressor |
| Biological process: | Metal homeostasis |
| Effector: | New effector |
| Regulog: | DtxR - Clostridia-3 |
| Statistics of regulated genes: | |
| - Genes | 12 |
| - Operons | 2 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Clostridia-3
- By TF family - DtxR
- By effector - New effector
- By pathway - Metal homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -50
Score: 6.5 Sequence: GGTTAGTTTTAGCTAACC
Locus tag: CLONEX_00483
Name: PF09605 Funciton: Hypothetical bacterial integral membrane protein (Trep_Strep)
Locus tag: CLONEX_00482
Name: COG0619 Funciton: ABC-type cobalt transport system, permease component CbiQ and related transporters
Locus tag: CLONEX_00481
Name: COG1123 Funciton: ATPase components of various ABC-type transport systems, contain duplicated ATPase
Locus tag: CLONEX_00480
Name: COG1132 Funciton: ABC-type multidrug transport system, ATPase and permease components
Locus tag: CLONEX_00479
Name: COG2274 Funciton: ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
Locus tag: CLONEX_00478
Name: dtxR Funciton: Putative metal-dependent transcriptional regulator, DtxR family |
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|
PF09605
|
Hypothetical bacterial integral membrane protein (Trep_Strep)
|
||
|
COG0619
|
ABC-type cobalt transport system, permease component CbiQ and related transporters
|
||
|
COG1123
|
ATPase components of various ABC-type transport systems, contain duplicated ATPase
|
||
|
COG1132
|
ABC-type multidrug transport system, ATPase and permease components
|
||
|
COG2274
|
ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
|
||
|
dtxR
|
Putative metal-dependent transcriptional regulator, DtxR family
|
||
|
Position: -37
Score: 6.2 Sequence: GGTTAGTTTTTTCTAACT
Locus tag: CLONEX_03805
Name: COG1132 Funciton: ABC-type multidrug transport system, ATPase and permease components
Locus tag: CLONEX_03804
Name: COG2274 Funciton: ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
Locus tag: CLONEX_03803
Name: COG1123 Funciton: ATPase components of various ABC-type transport systems, contain duplicated ATPase
Locus tag: CLONEX_03802
Name: COG0619 Funciton: ABC-type cobalt transport system, permease component CbiQ and related transporters
Locus tag: CLONEX_03801
Name: PF09605 Funciton: Hypothetical bacterial integral membrane protein (Trep_Strep)
Locus tag: CLONEX_03800
Name: dtxR Funciton: Putative metal-dependent transcriptional regulator, DtxR family |
|||
|
COG1132
|
ABC-type multidrug transport system, ATPase and permease components
|
||
|
COG2274
|
ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
|
||
|
COG1123
|
ATPase components of various ABC-type transport systems, contain duplicated ATPase
|
||
|
COG0619
|
ABC-type cobalt transport system, permease component CbiQ and related transporters
|
||
|
PF09605
|
Hypothetical bacterial integral membrane protein (Trep_Strep)
|
||
|
dtxR
|
Putative metal-dependent transcriptional regulator, DtxR family
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |