Regulon of SdhR in Methylibium petroleiphilum PM1

Properties
Regulator type:	Transcription factor
TF locus tag:	Mpe_A2171
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Tricarboxylic acid cycle
Effector:
Regulog:	SdhR - Comamonadaceae
Statistics of regulated genes:
- Genes	10
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 36 sites [see more]

Member of regulog collections

By taxonomy - Comamonadaceae
By TF family - GntR/Others
By pathway - Tricarboxylic acid cycle

Regulated operons
	Locus Tag	Name	Function
Position: -74 Score: 7.4 Sequence: TCTTATGTCTTATATAAGACATCTTT Locus tag: Mpe_A2171 Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family Locus tag: Mpe_A2170 Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit Locus tag: Mpe_A2169 Name: sdhD Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein Locus tag: Mpe_A2168 Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Locus tag: Mpe_A2167 Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Locus tag: Mpe_A2166 Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit Locus tag: Mpe_A2165 Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1)
	Mpe_A2171	sdhR	Transcriptional regulator of TCA cycle, GntR family
	Mpe_A2170	sdhC	Succinate dehydrogenase cytochrome b-556 subunit
	Mpe_A2169	sdhD	Succinate dehydrogenase hydrophobic membrane anchor protein
	Mpe_A2168	sdhA	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
	Mpe_A2167	sdhB	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
	Mpe_A2166	COG2938	succinate dehydrogenase iron-sulfur subunit
	Mpe_A2165	gltA	Citrate synthase (si) (EC 2.3.3.1)
Position: -152 Score: 7.4 Sequence: AAAGATGTCTTATATAAGACATAAGA Locus tag: Mpe_A2172 Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37) Locus tag: Mpe_A2173 Name: null Funciton: Citrate lyase beta chain (EC 4.1.3.6)
	Mpe_A2172	mdh	Malate dehydrogenase (EC 1.1.1.37)
	Mpe_A2173		Citrate lyase beta chain (EC 4.1.3.6)
Position: -103 Score: 6 Sequence: ATAGAAGTCTTATATAAGATAGAAGT Locus tag: Mpe_A1889 Name: aceA Funciton: Isocitrate lyase (EC 4.1.3.1)
	Mpe_A1889	aceA	Isocitrate lyase (EC 4.1.3.1)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD