Regulon of SdhR in Delftia acidovorans SPH-1

Properties
Regulator type:	Transcription factor
TF locus tag:	Daci_2428
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Tricarboxylic acid cycle
Effector:
Regulog:	SdhR - Comamonadaceae
Statistics of regulated genes:
- Genes	13
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 36 sites [see more]

Member of regulog collections

By taxonomy - Comamonadaceae
By TF family - GntR/Others
By pathway - Tricarboxylic acid cycle

Regulated operons
	Locus Tag	Name	Function
Position: -157 Score: 7.2 Sequence: GATCATATCTTATATAAGACATAAGA Locus tag: Daci_2429 Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37) Locus tag: Daci_2430 Name: tam Funciton: Trans-aconitate 2-methyltransferase (EC 2.1.1.144) Locus tag: Daci_2431 Name: citE Funciton: Citrate lyase beta chain (EC 4.1.3.6) Locus tag: Daci_2432 Name: Aave_2209 Funciton: hypothetical protein Locus tag: Daci_2433 Name: acnB Funciton: Aconitate hydratase (EC 4.2.1.3)
	Daci_2429	mdh	Malate dehydrogenase (EC 1.1.1.37)
	Daci_2430	tam	Trans-aconitate 2-methyltransferase (EC 2.1.1.144)
	Daci_2431	citE	Citrate lyase beta chain (EC 4.1.3.6)
	Daci_2432	Aave_2209	hypothetical protein
	Daci_2433	acnB	Aconitate hydratase (EC 4.2.1.3)
Position: -87 Score: 7.2 Sequence: TCTTATGTCTTATATAAGATATGATC Locus tag: Daci_2428 Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family Locus tag: Daci_2427 Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit Locus tag: Daci_2426 Name: sdhD Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein Locus tag: Daci_2425 Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Locus tag: Daci_2424 Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Locus tag: Daci_2423 Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit Locus tag: Daci_2422 Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1)
	Daci_2428	sdhR	Transcriptional regulator of TCA cycle, GntR family
	Daci_2427	sdhC	Succinate dehydrogenase cytochrome b-556 subunit
	Daci_2426	sdhD	Succinate dehydrogenase hydrophobic membrane anchor protein
	Daci_2425	sdhA	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
	Daci_2424	sdhB	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
	Daci_2423	COG2938	succinate dehydrogenase iron-sulfur subunit
	Daci_2422	gltA	Citrate synthase (si) (EC 2.3.3.1)
Position: -31 Score: 5.9 Sequence: AATTTAGTCTTGTATAAGACACAAGA Position: -1 Score: 5.3 Sequence: GATGAGGTCTTCTATAAGACTTAAAT Locus tag: Daci_4617 Name: aceA Funciton: Isocitrate lyase (EC 4.1.3.1)
	Daci_4617	aceA	Isocitrate lyase (EC 4.1.3.1)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD