Regulon of SdhR in Bordetella petrii DSM 12804

Properties
Regulator type:	Transcription factor
TF locus tag:	Bpet1819
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Tricarboxylic acid cycle
Effector:
Regulog:	SdhR - Alcaligenaceae
Statistics of regulated genes:
- Genes	11
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 14 sites [see more]

Member of regulog collections

By taxonomy - Alcaligenaceae
By TF family - GntR/Others
By pathway - Tricarboxylic acid cycle

Regulated operons
	Locus Tag	Name	Function
Position: -133 Score: 5.8 Sequence: AGCCAAGTCTTACATAAGATATAAGA Locus tag: Bpet3365 Name: acnA Funciton: Aconitate hydratase (EC 4.2.1.3)
	Bpet3365	acnA	Aconitate hydratase (EC 4.2.1.3)
Position: -105 Score: 6.6 Sequence: ACCCAAGTCTTATATAAGATATAAGA Locus tag: Bpet3354 Name: acnB Funciton: Aconitate hydratase (EC 4.2.1.3)
	Bpet3354	acnB	Aconitate hydratase (EC 4.2.1.3)
Position: -35 Score: 7.8 Sequence: TCTTATATCTTATATAAGACATAAGA Locus tag: Bpet1819 Name: sdhR Funciton: Transcriptional regulator of TCA cycle, GntR family Locus tag: Bpet1820 Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit Locus tag: Bpet1821 Name: sdhD Funciton: Succinate dehydrogenase, hydrophobic subunit, cytochrome b556 Locus tag: Bpet1822 Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Locus tag: Bpet1823 Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Locus tag: Bpet1824 Name: COG2938 Funciton: succinate dehydrogenase iron-sulfur subunit Locus tag: Bpet1825 Name: gltA Funciton: Citrate synthase (si) (EC 2.3.3.1)
	Bpet1819	sdhR	Transcriptional regulator of TCA cycle, GntR family
	Bpet1820	sdhC	Succinate dehydrogenase cytochrome b-556 subunit
	Bpet1821	sdhD	Succinate dehydrogenase, hydrophobic subunit, cytochrome b556
	Bpet1822	sdhA	Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
	Bpet1823	sdhB	Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
	Bpet1824	COG2938	succinate dehydrogenase iron-sulfur subunit
	Bpet1825	gltA	Citrate synthase (si) (EC 2.3.3.1)
Position: -162 Score: 7.8 Sequence: TCTTATGTCTTATATAAGATATAAGA Locus tag: Bpet1818 Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37)
	Bpet1818	mdh	Malate dehydrogenase (EC 1.1.1.37)
Position: -126 Score: 5.3 Sequence: TTTTTAGTCTTATATAAGAGAAGTGG Locus tag: Bpet3251 Name: aceA Funciton: Isocitrate lyase (EC 4.1.3.1)
	Bpet3251	aceA	Isocitrate lyase (EC 4.1.3.1)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD