Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of TsrR in Shewanella woodyi ATCC 51908

Properties
Regulator type: Transcription factor
TF locus tag: Swoo_4446, Swoo_4467
Regulator family: [Other]
Regulation mode:
Biological process: Thiosulfate reduction
Effector: Thiosulfate
Regulog: TsrR - Shewanellaceae
Statistics of regulated genes:
- Genes 25
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 40 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -265
Score: 5.7
Sequence: AACCTTTTAGATATCAAAAAAC
Locus tag: Swoo_4477
Name: tsrA
Funciton: Predicted thiosulfate respiratory reductase, cytochrome c-552/4 subunit TsrA
Locus tag: Swoo_4476
Name: tsrB
Funciton: Predicted thiosulfate respiratory reductase, rhodanese domain protein TsrB
Locus tag: Swoo_4475
Name: tsrC
Funciton: Predicted thiosulfate respiratory reductase maturation protein TsrC, peptidyl-prolyl cis-trans isomerase
Locus tag: Swoo_4474
Name: tsrD
Funciton: Predicted thiosulfate respiratory reductase maturation protein TsrD, cytochrome c-type heme lyase
Locus tag: Swoo_4473
Name: tsrE
Funciton: Predicted thiosulfate respiratory reductase, 4Fe-4S protein TsrE
Locus tag: Swoo_4472
Name: tsrF
Funciton: Predicted thiosulfate respiratory reductase, integral transmembrane protein TsrF
Locus tag: Swoo_4471
Name: tsrG
Funciton: Predicted thiosulfate respiratory reductase maturation protein, outer-membrane lipoprotein TsrG
Locus tag: Swoo_4470
Name: tsrH
Funciton: Predicted thiosulfate respiratory reductase maturation protein TsrH
Locus tag: Swoo_4469
Name: tsrI
Funciton: Predicted thiosulfate respiratory reductasematuration protein TsrI (ATPase)
Locus tag: Swoo_4468
Name: tsrY
Funciton: Predicted thiosulfate respiratory reductase maturation transmembrane protein TsrJ
Locus tag: Swoo_4467
Name: tsrR
Funciton: Predicted transcriptional regulator, winged HTH domain
Swoo_4477
tsrA
Predicted thiosulfate respiratory reductase, cytochrome c-552/4 subunit TsrA
Swoo_4476
tsrB
Predicted thiosulfate respiratory reductase, rhodanese domain protein TsrB
Swoo_4475
tsrC
Predicted thiosulfate respiratory reductase maturation protein TsrC, peptidyl-prolyl cis-trans isomerase
Swoo_4474
tsrD
Predicted thiosulfate respiratory reductase maturation protein TsrD, cytochrome c-type heme lyase
Swoo_4473
tsrE
Predicted thiosulfate respiratory reductase, 4Fe-4S protein TsrE
Swoo_4472
tsrF
Predicted thiosulfate respiratory reductase, integral transmembrane protein TsrF
Swoo_4471
tsrG
Predicted thiosulfate respiratory reductase maturation protein, outer-membrane lipoprotein TsrG
Swoo_4470
tsrH
Predicted thiosulfate respiratory reductase maturation protein TsrH
Swoo_4469
tsrI
Predicted thiosulfate respiratory reductasematuration protein TsrI (ATPase)
Swoo_4468
tsrY
Predicted thiosulfate respiratory reductase maturation transmembrane protein TsrJ
Swoo_4467
tsrR
Predicted transcriptional regulator, winged HTH domain
Position: -258
Score: 5.8
Sequence: CAGTTTTTAGATCTAAAAAATC
Position: -134
Score: 4.9
Sequence: TGTTTTTTATATGGAAAATACT
Locus tag: Swoo_4456
Name: tsrA
Funciton: Predicted thiosulfate respiratory reductase, cytochrome c-552/4 subunit TsrA
Locus tag: Swoo_4455
Name: tsrB
Funciton: Predicted thiosulfate respiratory reductase, rhodanese domain protein TsrB
Locus tag: Swoo_4454
Name: tsrC
Funciton: Predicted thiosulfate respiratory reductase maturation protein TsrC, peptidyl-prolyl cis-trans isomerase
Locus tag: Swoo_4453
Name: tsrD
Funciton: Predicted thiosulfate respiratory reductase maturation protein TsrD, cytochrome c-type heme lyase
Locus tag: Swoo_4452
Name: tsrE
Funciton: Predicted thiosulfate respiratory reductase, 4Fe-4S protein TsrE
Locus tag: Swoo_4451
Name: tsrF
Funciton: Predicted thiosulfate respiratory reductase, integral transmembrane protein TsrF
Locus tag: Swoo_4450
Name: tsrG
Funciton: Predicted thiosulfate respiratory reductase maturation protein, outer-membrane lipoprotein TsrG
Locus tag: Swoo_4449
Name: tsrH
Funciton: Predicted thiosulfate respiratory reductase maturation protein TsrH
Locus tag: Swoo_4448
Name: tsrI
Funciton: Predicted thiosulfate respiratory reductasematuration protein TsrI (ATPase)
Locus tag: Swoo_4447
Name: tsrY
Funciton: Predicted thiosulfate respiratory reductase maturation transmembrane protein TsrJ
Locus tag: Swoo_4446
Name: tsrR
Funciton: Predicted transcriptional regulator, winged HTH domain
Swoo_4456
tsrA
Predicted thiosulfate respiratory reductase, cytochrome c-552/4 subunit TsrA
Swoo_4455
tsrB
Predicted thiosulfate respiratory reductase, rhodanese domain protein TsrB
Swoo_4454
tsrC
Predicted thiosulfate respiratory reductase maturation protein TsrC, peptidyl-prolyl cis-trans isomerase
Swoo_4453
tsrD
Predicted thiosulfate respiratory reductase maturation protein TsrD, cytochrome c-type heme lyase
Swoo_4452
tsrE
Predicted thiosulfate respiratory reductase, 4Fe-4S protein TsrE
Swoo_4451
tsrF
Predicted thiosulfate respiratory reductase, integral transmembrane protein TsrF
Swoo_4450
tsrG
Predicted thiosulfate respiratory reductase maturation protein, outer-membrane lipoprotein TsrG
Swoo_4449
tsrH
Predicted thiosulfate respiratory reductase maturation protein TsrH
Swoo_4448
tsrI
Predicted thiosulfate respiratory reductasematuration protein TsrI (ATPase)
Swoo_4447
tsrY
Predicted thiosulfate respiratory reductase maturation transmembrane protein TsrJ
Swoo_4446
tsrR
Predicted transcriptional regulator, winged HTH domain
Position: -320
Score: 5.7
Sequence: GTTTTTTGATATCTAAAAGGTT
Locus tag: Swoo_4478
Name: ccmF-2
Funciton: Cytochrome c heme lyase subunit CcmF
Locus tag: Swoo_4479
Name: ccmL
Funciton: Cytochrome c heme lyase subunit CcmL
Locus tag: Swoo_4480
Name: ccmH
Funciton: Thioredoxin
Swoo_4478
ccmF-2
Cytochrome c heme lyase subunit CcmF
Swoo_4479
ccmL
Cytochrome c heme lyase subunit CcmL
Swoo_4480
ccmH
Thioredoxin
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