Regulon of MdcY in Bradyrhizobium japonicum USDA 110
| Regulator type: | Transcription factor |
| TF locus tag: | blr1279 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Malonate metabolism |
| Effector: | |
| Regulog: | MdcY - Rhizobiales |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By TF family - GntR/Others
- By pathway - Malonate metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -82
Score: 4 Sequence: GCGTATACAC
Position: -42
Score: 3.6 Sequence: TTAGATACAA
Locus tag: bll1276
Name: mdcA Funciton: Malonate decarboxylase alpha subunit |
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mdcA
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Malonate decarboxylase alpha subunit
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Position: -161
Score: 3.6 Sequence: TTGTATCTAA
Position: -121
Score: 4 Sequence: GTGTATACGC
Locus tag: blr1277
Name: mdcL Funciton: Malonate transporter, MadL subunit
Locus tag: blr1278
Name: mdcM Funciton: Malonate transporter, MadM subunit
Locus tag: blr1279
Name: mdcY Funciton: Transcriptional regulator of malonate metabolism, GntR family |
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mdcL
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Malonate transporter, MadL subunit
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mdcM
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Malonate transporter, MadM subunit
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mdcY
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Transcriptional regulator of malonate metabolism, GntR family
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Position: -46
Score: 3.6 Sequence: TTGTACGCAC
Locus tag: bll0269
Name: mdcC Funciton: Malonate decarboxylase delta subunit
Locus tag: bll0268
Name: mdcD Funciton: Malonate decarboxylase beta subunit
Locus tag: bll0267
Name: mdcE Funciton: Malonate decarboxylase gamma subunit
Locus tag: bll0266
Name: mdcG Funciton: Phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.-)
Locus tag: bll0265
Name: mdcB Funciton: Triphosphoribosyl-dephospho-CoA synthetase (EC 2.7.8.25)
Locus tag: bll0264
Name: mdcF Funciton: malonate transporter
Locus tag: bll0263
Name: null Funciton: Malonyl CoA acyl carrier protein transacylase (EC 2.3.1.39) |
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mdcC
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Malonate decarboxylase delta subunit
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mdcD
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Malonate decarboxylase beta subunit
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mdcE
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Malonate decarboxylase gamma subunit
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mdcG
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Phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.-)
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mdcB
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Triphosphoribosyl-dephospho-CoA synthetase (EC 2.7.8.25)
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mdcF
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malonate transporter
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Malonyl CoA acyl carrier protein transacylase (EC 2.3.1.39)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |