Regulon of UxuR3 in Variovorax paradoxus S110

Properties
Regulator type:	Transcription factor
TF locus tag:	Vapar_2876
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Glucuronate utilization
Effector:
Regulog:	UxuR3 - Comamonadaceae
Statistics of regulated genes:
- Genes	9
- Operons	1
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 9 sites [see more]

Member of regulog collections

By taxonomy - Comamonadaceae
By TF family - GntR/Others
By pathway - Glucuronate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -69 Score: 5 Sequence: CTAGTGGTAAACCACTAT Position: -46 Score: 4.8 Sequence: TAATTGGTATGCCACGCA Locus tag: Vapar_2876 Name: uxuR3 Funciton: Predicted transcriptional regulator for glucuronate utilization, GntR family Locus tag: Vapar_2877 Name: Aave_2470 Funciton: Cyclohexadienyl dehydratase (EC 4.2.1.51)(EC 4.2.1.91) # Periplasmic precursor Locus tag: Vapar_2878 Name: COG0834 Funciton: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Locus tag: Vapar_2879 Name: COG1063 Funciton: Zn-dependent dehydrogenase Locus tag: Vapar_2880 Name: COG0765 Funciton: ABC-type amino acid transport system, permease component Locus tag: Vapar_2881 Name: COG0765-2 Funciton: ABC-type amino acid transport system, permease component Locus tag: Vapar_2882 Name: COG1126 Funciton: ABC-type polar amino acid transport system, ATPase component Locus tag: Vapar_2883 Name: Bpro_3978 Funciton: Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein Locus tag: Vapar_2884 Name: uxuA Funciton: D-mannonate oxidoreductase (EC 1.1.1.57)
	Vapar_2876	uxuR3	Predicted transcriptional regulator for glucuronate utilization, GntR family
	Vapar_2877	Aave_2470	Cyclohexadienyl dehydratase (EC 4.2.1.51)(EC 4.2.1.91) # Periplasmic precursor
	Vapar_2878	COG0834	ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
	Vapar_2879	COG1063	Zn-dependent dehydrogenase
	Vapar_2880	COG0765	ABC-type amino acid transport system, permease component
	Vapar_2881	COG0765-2	ABC-type amino acid transport system, permease component
	Vapar_2882	COG1126	ABC-type polar amino acid transport system, ATPase component
	Vapar_2883	Bpro_3978	Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein
	Vapar_2884	uxuA	D-mannonate oxidoreductase (EC 1.1.1.57)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD