Regulon of UxuR3 in Variovorax paradoxus S110
| Regulator type: | Transcription factor |
| TF locus tag: | Vapar_2876 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Glucuronate utilization |
| Effector: | |
| Regulog: | UxuR3 - Comamonadaceae |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 1 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Comamonadaceae
- By TF family - GntR/Others
- By pathway - Glucuronate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -69
Score: 5 Sequence: CTAGTGGTAAACCACTAT
Position: -46
Score: 4.8 Sequence: TAATTGGTATGCCACGCA
Locus tag: Vapar_2876
Name: uxuR3 Funciton: Predicted transcriptional regulator for glucuronate utilization, GntR family
Locus tag: Vapar_2877
Name: Aave_2470 Funciton: Cyclohexadienyl dehydratase (EC 4.2.1.51)(EC 4.2.1.91) # Periplasmic precursor
Locus tag: Vapar_2878
Name: COG0834 Funciton: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Locus tag: Vapar_2879
Name: COG1063 Funciton: Zn-dependent dehydrogenase
Locus tag: Vapar_2880
Name: COG0765 Funciton: ABC-type amino acid transport system, permease component
Locus tag: Vapar_2881
Name: COG0765-2 Funciton: ABC-type amino acid transport system, permease component
Locus tag: Vapar_2882
Name: COG1126 Funciton: ABC-type polar amino acid transport system, ATPase component
Locus tag: Vapar_2883
Name: Bpro_3978 Funciton: Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein
Locus tag: Vapar_2884
Name: uxuA Funciton: D-mannonate oxidoreductase (EC 1.1.1.57) |
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uxuR3
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Predicted transcriptional regulator for glucuronate utilization, GntR family
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Aave_2470
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Cyclohexadienyl dehydratase (EC 4.2.1.51)(EC 4.2.1.91) # Periplasmic precursor
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COG0834
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ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
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COG1063
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Zn-dependent dehydrogenase
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COG0765
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ABC-type amino acid transport system, permease component
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COG0765-2
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ABC-type amino acid transport system, permease component
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COG1126
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ABC-type polar amino acid transport system, ATPase component
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Bpro_3978
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Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein
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uxuA
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D-mannonate oxidoreductase (EC 1.1.1.57)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |