Regulon of UxuR2 in Bradyrhizobium japonicum USDA 110
| Regulator type: | Transcription factor |
| TF locus tag: | bll6835, bll3929 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Galacturonate utilization |
| Effector: | |
| Regulog: | UxuR2 - Rhizobiales |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By TF family - GntR/Others
- By pathway - Galacturonate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -74
Score: 5 Sequence: AAACTGGTCAGTCCAAATT
Position: -60
Score: 5.5 Sequence: AAATTGGTCTGACCAGCTT
Locus tag: bll3929
Name: uxuR2-3 Funciton: Predicted transcriptional regulator for glucuronate/galacturonate utilization, GntR family |
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uxuR2-3
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Predicted transcriptional regulator for glucuronate/galacturonate utilization, GntR family
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Position: -73
Score: 5.5 Sequence: AAGCTGGTCAGACCAATTT
Position: -59
Score: 5 Sequence: AATTTGGACTGACCAGTTT
Locus tag: blr3930
Name: null Funciton: aminotransferase
Locus tag: blr3931
Name: null Funciton: blr3931; probable substrate-binding protein
Locus tag: blr3932
Name: blr3932 Funciton: probable N,N-dimethylformamidase large subunit (EC 3.5.1.56) |
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aminotransferase
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blr3931; probable substrate-binding protein
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blr3932
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probable N,N-dimethylformamidase large subunit (EC 3.5.1.56)
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Position: -47
Score: 5.7 Sequence: TAATTGGCCTTACCAATTG
Locus tag: blr6836
Name: uxuB Funciton: D-mannonate oxidoreductase (EC 1.1.1.57) |
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uxuB
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D-mannonate oxidoreductase (EC 1.1.1.57)
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Position: 10
Score: 5.7 Sequence: CAATTGGTAAGGCCAATTA
Locus tag: bll6835
Name: uxuR2 Funciton: Predicted transcriptional regulator for glucuronate/galacturonate utilization, GntR family
Locus tag: bll6834
Name: dctP Funciton: TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein
Locus tag: bll6833
Name: dctQ Funciton: TRAP-type C4-dicarboxylate transport system, small permease component
Locus tag: bll6832
Name: dctM Funciton: TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter
Locus tag: bll6831
Name: idnD Funciton: L-idonate 5-dehydrogenase (EC 1.1.1.264)
Locus tag: bll6830
Name: uxuA2 Funciton: D-Mannonate dehydratase (EC 4.2.1.8) |
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uxuR2
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Predicted transcriptional regulator for glucuronate/galacturonate utilization, GntR family
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dctP
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TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein
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dctQ
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TRAP-type C4-dicarboxylate transport system, small permease component
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dctM
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TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter
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idnD
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L-idonate 5-dehydrogenase (EC 1.1.1.264)
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uxuA2
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D-Mannonate dehydratase (EC 4.2.1.8)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |