Regulon of UxuR2 in Agrobacterium tumefaciens str. C58 (Cereon)

Properties
Regulator type:	Transcription factor
TF locus tag:	Atu3252, Atu2821
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Galacturonate utilization
Effector:
Regulog:	UxuR2 - Rhizobiales
Statistics of regulated genes:
- Genes	15
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 17 sites [see more]

Member of regulog collections

By taxonomy - Rhizobiales
By TF family - GntR/Others
By pathway - Galacturonate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -205 Score: 4.8 Sequence: CAAATGGTTAGGCCGGTTT Position: -183 Score: 5.2 Sequence: ATAATGGTCAAGCCAATTA Position: 1 Score: 4.5 Sequence: TGAATGGTCAGGCCAAAAT Locus tag: Atu2821 Name: uxuR2-2 Funciton: Predicted transcriptional regulator for glucuronate/galacturonate utilization, GntR family Locus tag: Atu2822 Name: garD Funciton: D-galactarate dehydratase/Altronate hydrolase (EC 4.2.1.7)
	Atu2821	uxuR2-2	Predicted transcriptional regulator for glucuronate/galacturonate utilization, GntR family
	Atu2822	garD	D-galactarate dehydratase/Altronate hydrolase (EC 4.2.1.7)
Position: -64 Score: 5.3 Sequence: AAATTGGTAAGACCATCTT Locus tag: Atu3252 Name: uxuR2 Funciton: Predicted transcriptional regulator for glucuronate/galacturonate utilization, GntR family Locus tag: Atu3253 Name: dctP Funciton: TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein Locus tag: Atu3254 Name: dctQ Funciton: TRAP-type C4-dicarboxylate transport system, small permease component Locus tag: Atu3255 Name: dctM Funciton: TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter Locus tag: Atu3256 Name: idnD2 Funciton: zinc-binding dehydrogenase similar to L-idonate 5-dehydrogenase Locus tag: Atu3257 Name: uxuA Funciton: D-Mannonate dehydratase (EC 4.2.1.8)
	Atu3252	uxuR2	Predicted transcriptional regulator for glucuronate/galacturonate utilization, GntR family
	Atu3253	dctP	TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein
	Atu3254	dctQ	TRAP-type C4-dicarboxylate transport system, small permease component
	Atu3255	dctM	TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter
	Atu3256	idnD2	zinc-binding dehydrogenase similar to L-idonate 5-dehydrogenase
	Atu3257	uxuA	D-Mannonate dehydratase (EC 4.2.1.8)
Position: -322 Score: 4.5 Sequence: ATTTTGGCCTGACCATTCA Position: -138 Score: 5.2 Sequence: TAATTGGCTTGACCATTAT Position: -116 Score: 4.8 Sequence: AAACCGGCCTAACCATTTG Locus tag: Atu2819 Name: rbsA Funciton: ABC transporter, nucleotide binding/ATPase protein (ribose) Locus tag: Atu2818 Name: rbsC Funciton: ABC transporter, permease protein (ribose) Locus tag: Atu2817 Name: rbsB Funciton: ABC transporter, substrate binding protein (ribose) Locus tag: Atu2816 Name: null Funciton: oxidoreductase Locus tag: Atu2815 Name: null Funciton: hypothetical protein Locus tag: Atu2814 Name: idnD3 Funciton: zinc-binding dehydrogenase similar to L-idonate 5-dehydrogenase Locus tag: Atu2813 Name: uxaB Funciton: altronate oxidoreductase
	Atu2819	rbsA	ABC transporter, nucleotide binding/ATPase protein (ribose)
	Atu2818	rbsC	ABC transporter, permease protein (ribose)
	Atu2817	rbsB	ABC transporter, substrate binding protein (ribose)
	Atu2816		oxidoreductase
	Atu2815		hypothetical protein
	Atu2814	idnD3	zinc-binding dehydrogenase similar to L-idonate 5-dehydrogenase
	Atu2813	uxaB	altronate oxidoreductase

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