Regulon of UxuR2 in Bordetella petrii DSM 12804

Properties
Regulator type:	Transcription factor
TF locus tag:	Bpet2346, Bpet3949
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Glucuronate utilization; Galacturonate utilization
Effector:
Regulog:	UxuR2 - Alcaligenaceae
Statistics of regulated genes:
- Genes	20
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 6 sites [see more]

Member of regulog collections

By taxonomy - Alcaligenaceae
By TF family - GntR/Others
By pathway - Glucuronate utilization
By pathway - Galacturonate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -151 Score: 5.1 Sequence: AAAGTGGCCTTACCACTTT Locus tag: Bpet3950 Name: dgkA Funciton: Diacylglycerol kinase (EC 2.7.1.107)
	Bpet3950	dgkA	Diacylglycerol kinase (EC 2.7.1.107)
Position: -138 Score: 4.7 Sequence: CTAGTGGTCAGGCCACTGA Locus tag: Bpet2347 Name: null Funciton: probable short-chain dehydrogenase
	Bpet2347		probable short-chain dehydrogenase
Position: -40 Score: 5.1 Sequence: AAAGTGGTAAGGCCACTTT Locus tag: Bpet3949 Name: uxuR2-2 Funciton: Predicted transcriptional regulator for glucuronate/galacturonate utilization, GntR family Locus tag: Bpet3948 Name: gutB/tdh Funciton: L-idonate 5-dehydrogenase Locus tag: Bpet3947 Name: dctP Funciton: TRAP C4-dicarboxylate-transporter, periplasmic binding protein Locus tag: Bpet3946 Name: dctM Funciton: TRAP C4-dicarboxylate transporter, small permease component Locus tag: Bpet3945 Name: dctQ Funciton: TRAP C4-dicarboxylate transporter, large permease component Locus tag: Bpet3944 Name: fabG Funciton: oxidoreductase Locus tag: Bpet3943 Name: mhpD Funciton: 2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase / 5-carboxymethyl-2-oxo-hex-3-ene-1, 7-dioatedecarboxylase Locus tag: Bpet3942 Name: uxaA Funciton: Altronate/galactarate dehydratase Locus tag: Bpet3941 Name: COG4948 Funciton: Mandelate racemase/muconate lactonizing enzyme Locus tag: Bpet3940 Name: uxuA Funciton: Altronate dehydrogenase
	Bpet3949	uxuR2-2	Predicted transcriptional regulator for glucuronate/galacturonate utilization, GntR family
	Bpet3948	gutB/tdh	L-idonate 5-dehydrogenase
	Bpet3947	dctP	TRAP C4-dicarboxylate-transporter, periplasmic binding protein
	Bpet3946	dctM	TRAP C4-dicarboxylate transporter, small permease component
	Bpet3945	dctQ	TRAP C4-dicarboxylate transporter, large permease component
	Bpet3944	fabG	oxidoreductase
	Bpet3943	mhpD	2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase / 5-carboxymethyl-2-oxo-hex-3-ene-1, 7-dioatedecarboxylase
	Bpet3942	uxaA	Altronate/galactarate dehydratase
	Bpet3941	COG4948	Mandelate racemase/muconate lactonizing enzyme
	Bpet3940	uxuA	Altronate dehydrogenase
Position: -40 Score: 4.7 Sequence: TCAGTGGCCTGACCACTAG Locus tag: Bpet2346 Name: uxuR2 Funciton: Predicted transcriptional regulator for glucuronate/galacturonate utilization, GntR family Locus tag: Bpet2345 Name: dctP Funciton: TRAP-type C4-dicarboxylate transport system, periplasmic component Locus tag: Bpet2344 Name: dctM Funciton: TRAP C4-dicarboxylate transport system, small permease component Locus tag: Bpet2343 Name: dctQ Funciton: TRAP C4-dicarboxylate transport system, large permease component Locus tag: Bpet2342 Name: citE Funciton: Citrate lyase beta chain (EC 4.1.3.6) Locus tag: Bpet2341 Name: ilvG Funciton: COG0028: Thiamine pyrophosphate-requiring enzymes/acetolactate synthase large subunit Locus tag: Bpet2340 Name: amaB Funciton: N-carbamoyl-L-amino acid amidohydrolase Locus tag: Bpet2339 Name: aldH Funciton: Aldehyde dehydrogenase (EC 1.2.1.3)
	Bpet2346	uxuR2	Predicted transcriptional regulator for glucuronate/galacturonate utilization, GntR family
	Bpet2345	dctP	TRAP-type C4-dicarboxylate transport system, periplasmic component
	Bpet2344	dctM	TRAP C4-dicarboxylate transport system, small permease component
	Bpet2343	dctQ	TRAP C4-dicarboxylate transport system, large permease component
	Bpet2342	citE	Citrate lyase beta chain (EC 4.1.3.6)
	Bpet2341	ilvG	COG0028: Thiamine pyrophosphate-requiring enzymes/acetolactate synthase large subunit
	Bpet2340	amaB	N-carbamoyl-L-amino acid amidohydrolase
	Bpet2339	aldH	Aldehyde dehydrogenase (EC 1.2.1.3)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of UxuR2 in Bordetella petrii DSM 12804

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --