Regulon of UxuR2 in Burkholderia phymatum STM815

Properties
Regulator type:	Transcription factor
TF locus tag:	Bphy_6346, Bphy_5153
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Glucuronate utilization; Galacturonate utilization
Effector:
Regulog:	UxuR2 - Burkholderia
Statistics of regulated genes:
- Genes	17
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 23 sites [see more]

Member of regulog collections

By taxonomy - Burkholderia
By TF family - GntR/Others
By pathway - Glucuronate utilization
By pathway - Galacturonate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -93 Score: 4.8 Sequence: ATACTGGCTTGACCAAACG Position: -50 Score: 5 Sequence: CAATTGGACTGACCACGCG Locus tag: Bphy_6345 Name: mglA Funciton: sugar ABC transporter, ATP-binding component Locus tag: Bphy_6344 Name: Bamb_1227 Funciton: sugar ABC transport system, permease protein RbsC (TC 3.A.1.2.1) Locus tag: Bphy_6343 Name: Bamb_1226 Funciton: sugar ABC transporter, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) Locus tag: Bphy_6342 Name: tas Funciton: L-fuco-beta-pyranose dehydrogenase Locus tag: Bphy_6341 Name: tdh Funciton: Alcohol dehydrogenase GroES-like Locus tag: Bphy_6340 Name: uxaB Funciton: Altronate oxidoreductase
	Bphy_6345	mglA	sugar ABC transporter, ATP-binding component
	Bphy_6344	Bamb_1227	sugar ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
	Bphy_6343	Bamb_1226	sugar ABC transporter, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
	Bphy_6342	tas	L-fuco-beta-pyranose dehydrogenase
	Bphy_6341	tdh	Alcohol dehydrogenase GroES-like
	Bphy_6340	uxaB	Altronate oxidoreductase
Position: -117 Score: 3.6 Sequence: TCGGTGGCCTGACCAAAAC Position: -98 Score: 3.8 Sequence: CGATTGGCCTGACCGCAGC Locus tag: Bphy_5157 Name: null Funciton: putative simple sugar transport system substrate-binding protein Locus tag: Bphy_5158 Name: mglA Funciton: ABC transporter related Locus tag: Bphy_5159 Name: null Funciton: inner-membrane translocator Locus tag: Bphy_5160 Name: null Funciton: inner-membrane translocator Locus tag: Bphy_5161 Name: COG3386 Funciton: gluconolactonase Locus tag: Bphy_5162 Name: null Funciton: putative ABC transporter
	Bphy_5157		putative simple sugar transport system substrate-binding protein
	Bphy_5158	mglA	ABC transporter related
	Bphy_5159		inner-membrane translocator
	Bphy_5160		inner-membrane translocator
	Bphy_5161	COG3386	gluconolactonase
	Bphy_5162		putative ABC transporter
Position: -261 Score: 4.9 Sequence: AAAGTGGCTTGACCACTGG Position: -220 Score: 4.5 Sequence: AATCTGGTAAGACCACATA Locus tag: Bphy_5154 Name: uhpC Funciton: Probable glucarate transporter Locus tag: Bphy_5155 Name: uxaA Funciton: Altronate dehydratase Locus tag: Bphy_5156 Name: idi Funciton: L-lactate dehydrogenase (cytochrome)
	Bphy_5154	uhpC	Probable glucarate transporter
	Bphy_5155	uxaA	Altronate dehydratase
	Bphy_5156	idi	L-lactate dehydrogenase (cytochrome)
Position: -201 Score: 4.5 Sequence: TATGTGGTCTTACCAGATT Position: -160 Score: 4.9 Sequence: CCAGTGGTCAAGCCACTTT Locus tag: Bphy_5153 Name: uxuR3-3 Funciton: Predicted transcriptional regulator for glucuronate/galacturonate utilization, GntR family
	Bphy_5153	uxuR3-3	Predicted transcriptional regulator for glucuronate/galacturonate utilization, GntR family
Position: -198 Score: 5 Sequence: CGCGTGGTCAGTCCAATTG Position: -155 Score: 4.8 Sequence: CGTTTGGTCAAGCCAGTAT Locus tag: Bphy_6346 Name: uxuR2 Funciton: Predicted transcriptional regulator for glucuronate/galacturonate utilization, GntR family
	Bphy_6346	uxuR2	Predicted transcriptional regulator for glucuronate/galacturonate utilization, GntR family

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of UxuR2 in Burkholderia phymatum STM815

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --