Regulon of GabR2 in Variovorax paradoxus S110

Properties
Regulator type:	Transcription factor
TF locus tag:	Vapar_4694
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Gamma-aminobutyrate utilization
Effector:	Gamma-aminobutyric acid
Regulog:	GabR2 - Comamonadaceae
Statistics of regulated genes:
- Genes	6
- Operons	1
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 4 sites [see more]

Member of regulog collections

By taxonomy - Comamonadaceae
By TF family - GntR/MocR
By effector - Gamma-aminobutyric acid
By pathway - Gamma-aminobutyrate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -120 Score: 14.8 Sequence: GTATGTACAGGA-(6)-ACCAGTACAGTC-(17)-CGGTGTACATGG Locus tag: Vapar_4695 Name: gabT Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) Locus tag: Vapar_4696 Name: gbtA Funciton: Predicted gamma-aminobutyrate ABC transporter, ATP-binding component Locus tag: Vapar_4697 Name: gbtD Funciton: Predicted gamma-aminobutyrate ABC transporter, periplasmic binding protein Locus tag: Vapar_4698 Name: gbtB Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component Locus tag: Vapar_4699 Name: gbtC Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component Locus tag: Vapar_4700 Name: speB Funciton: Agmatinase (EC 3.5.3.11)
	Vapar_4695	gabT	Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
	Vapar_4696	gbtA	Predicted gamma-aminobutyrate ABC transporter, ATP-binding component
	Vapar_4697	gbtD	Predicted gamma-aminobutyrate ABC transporter, periplasmic binding protein
	Vapar_4698	gbtB	Predicted gamma-aminobutyrate ABC transporter, permease component
	Vapar_4699	gbtC	Predicted gamma-aminobutyrate ABC transporter, permease component
	Vapar_4700	speB	Agmatinase (EC 3.5.3.11)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD