Regulon of GabR2 in Rhodoferax ferrireducens DSM 15236

Properties
Regulator type:	Transcription factor
TF locus tag:	Rfer_0591
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Gamma-aminobutyrate utilization
Effector:	Gamma-aminobutyric acid
Regulog:	GabR2 - Comamonadaceae
Statistics of regulated genes:
- Genes	7
- Operons	1
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 4 sites [see more]

Member of regulog collections

By taxonomy - Comamonadaceae
By TF family - GntR/MocR
By effector - Gamma-aminobutyric acid
By pathway - Gamma-aminobutyrate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -126 Score: 15.3 Sequence: GTATGTAGCGGT-(6)-GGCTGCACAGTG-(17)-ATCTGTATATGG Locus tag: Rfer_0592 Name: gabT Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) Locus tag: Rfer_0593 Name: gbtA Funciton: Predicted gamma-aminobutyrate ABC transporter, ATP-binding component Locus tag: Rfer_0594 Name: gbtD Funciton: Predicted gamma-aminobutyrate ABC transporter, periplasmic binding protein Locus tag: Rfer_0595 Name: gbtB Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component Locus tag: Rfer_0596 Name: gbtC Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component Locus tag: Rfer_0597 Name: speB Funciton: Agmatinase (EC 3.5.3.11) Locus tag: Rfer_0598 Name: gabD Funciton: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)
	Rfer_0592	gabT	Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
	Rfer_0593	gbtA	Predicted gamma-aminobutyrate ABC transporter, ATP-binding component
	Rfer_0594	gbtD	Predicted gamma-aminobutyrate ABC transporter, periplasmic binding protein
	Rfer_0595	gbtB	Predicted gamma-aminobutyrate ABC transporter, permease component
	Rfer_0596	gbtC	Predicted gamma-aminobutyrate ABC transporter, permease component
	Rfer_0597	speB	Agmatinase (EC 3.5.3.11)
	Rfer_0598	gabD	Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD