Regulon of Pden_3389 in Roseovarius sp. 217

Properties
Regulator type:	Transcription factor
TF locus tag:	ROS217_09195
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Glycolate utilization; Lactate utilization
Effector:
Regulog:	Pden_3389 - Rhodobacterales
Statistics of regulated genes:
- Genes	9
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 17 sites [see more]

Member of regulog collections

By taxonomy - Rhodobacterales
By TF family - GntR/Others
By pathway - Glycolate utilization
By pathway - Lactate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -71 Score: 3.9 Sequence: TTGTTGAATTGAATTC Position: -66 Score: 3.8 Sequence: GAATTGAATTCTGAAT Position: -59 Score: 4.8 Sequence: ATTCTGAATTCAATAT Locus tag: ROS217_09190 Name: dld2 Funciton: D-lactate dehydrogenase, alternative Locus tag: ROS217_09195 Name: Pden_3389 Funciton: Transcriptional regulator associated with tricarboxylic transport, GntR family
	ROS217_09190	dld2	D-lactate dehydrogenase, alternative
	ROS217_09195	Pden_3389	Transcriptional regulator associated with tricarboxylic transport, GntR family
Position: -100 Score: 4.8 Sequence: ATATTGAATTCAGAAT Position: -93 Score: 3.8 Sequence: ATTCAGAATTCAATTC Position: -88 Score: 3.9 Sequence: GAATTCAATTCAACAA Locus tag: ROS217_09185 Name: sgaA Funciton: Serine--glyoxylate aminotransferase (EC 2.6.1.45) Locus tag: ROS217_09180 Name: tctC Funciton: Tricarboxylate transport protein TctC, periplasmic binding subunit Locus tag: ROS217_09175 Name: tctB Funciton: Tricarboxylate transport protein TctB, small permease component Locus tag: ROS217_09170 Name: tctA Funciton: Tricarboxylate transport membrane protein TctA, large permease component Locus tag: ROS217_09165 Name: null Funciton: Enoyl-CoA hydratase/isomerase Locus tag: ROS217_09160 Name: caiB Funciton: L-carnitine dehydratase/bile acid-inducible protein F Locus tag: ROS217_09155 Name: Jann_1165 Funciton: 2-keto-4-pentenoate hydratase (EC 4.2.1.-)
	ROS217_09185	sgaA	Serine--glyoxylate aminotransferase (EC 2.6.1.45)
	ROS217_09180	tctC	Tricarboxylate transport protein TctC, periplasmic binding subunit
	ROS217_09175	tctB	Tricarboxylate transport protein TctB, small permease component
	ROS217_09170	tctA	Tricarboxylate transport membrane protein TctA, large permease component
	ROS217_09165		Enoyl-CoA hydratase/isomerase
	ROS217_09160	caiB	L-carnitine dehydratase/bile acid-inducible protein F
	ROS217_09155	Jann_1165	2-keto-4-pentenoate hydratase (EC 4.2.1.-)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD