Regulon of Pden_3389 in Roseovarius nubinhibens ISM

Properties
Regulator type:	Transcription factor
TF locus tag:	ISM_03985
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Glycolate utilization; Lactate utilization
Effector:
Regulog:	Pden_3389 - Rhodobacterales
Statistics of regulated genes:
- Genes	7
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 17 sites [see more]

Member of regulog collections

By taxonomy - Rhodobacterales
By TF family - GntR/Others
By pathway - Glycolate utilization
By pathway - Lactate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -238 Score: 4.6 Sequence: ATTTTGCATTCACTAT Position: -142 Score: 4.8 Sequence: AAAATGCATTCATTAT Locus tag: ISM_03990 Name: sgaA Funciton: Serine--glyoxylate aminotransferase (EC 2.6.1.45) Locus tag: ISM_03995 Name: tctC Funciton: Tricarboxylate transport protein TctC, periplasmic binding subunit Locus tag: ISM_04000 Name: tctB Funciton: Tricarboxylate transport protein TctB, small permease component Locus tag: ISM_04005 Name: tctA Funciton: Tricarboxylate transport membrane protein TctA, large permease component Locus tag: ISM_04010 Name: dld2 Funciton: D-lactate dehydrogenase, alternative
	ISM_03990	sgaA	Serine--glyoxylate aminotransferase (EC 2.6.1.45)
	ISM_03995	tctC	Tricarboxylate transport protein TctC, periplasmic binding subunit
	ISM_04000	tctB	Tricarboxylate transport protein TctB, small permease component
	ISM_04005	tctA	Tricarboxylate transport membrane protein TctA, large permease component
	ISM_04010	dld2	D-lactate dehydrogenase, alternative
Position: -110 Score: 4.8 Sequence: ATAATGAATGCATTTT Position: -14 Score: 4.6 Sequence: ATAGTGAATGCAAAAT Locus tag: ISM_03985 Name: Pden_3389 Funciton: Transcriptional regulator associated with tricarboxylic transport, GntR family Locus tag: ISM_03980 Name: Jann_1165 Funciton: 2-keto-4-pentenoate hydratase (EC 4.2.1.-)
	ISM_03985	Pden_3389	Transcriptional regulator associated with tricarboxylic transport, GntR family
	ISM_03980	Jann_1165	2-keto-4-pentenoate hydratase (EC 4.2.1.-)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD