Regulon of Pden_3389 in Paracoccus denitrificans PD1222
| Regulator type: | Transcription factor |
| TF locus tag: | Pden_3389 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Glycolate utilization; Lactate utilization |
| Effector: | |
| Regulog: | Pden_3389 - Rhodobacterales |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By TF family - GntR/Others
- By pathway - Glycolate utilization
- By pathway - Lactate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -184
Score: 3.9 Sequence: ACATTGCATGCAATGT
Position: -100
Score: 4.1 Sequence: TGTTTGCATGCAACTG
Position: -38
Score: 4.5 Sequence: AGATTGCATGCAACTT
Locus tag: Pden_3389
Name: Pden_3389 Funciton: Transcriptional regulator associated with tricarboxylic transport, GntR family |
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Pden_3389
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Transcriptional regulator associated with tricarboxylic transport, GntR family
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Position: -196
Score: 4.1 Sequence: CAGTTGCATGCAAACA
Position: -112
Score: 3.9 Sequence: ACATTGCATGCAATGT
Locus tag: Pden_3388
Name: null Funciton: Homoserine dehydrogenase (EC 1.1.1.3)
Locus tag: Pden_3387
Name: tctC Funciton: Tricarboxylate transport protein TctC, periplasmic binding subunit
Locus tag: Pden_3386
Name: null Funciton: Kynurenine formamidase, bacterial (EC 3.5.1.9)
Locus tag: Pden_3385
Name: tctB Funciton: Tricarboxylate transport protein TctB, small permease component
Locus tag: Pden_3384
Name: tctA Funciton: Tricarboxylate transport membrane protein TctA, large permease component |
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Homoserine dehydrogenase (EC 1.1.1.3)
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tctC
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Tricarboxylate transport protein TctC, periplasmic binding subunit
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Kynurenine formamidase, bacterial (EC 3.5.1.9)
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tctB
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Tricarboxylate transport protein TctB, small permease component
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tctA
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Tricarboxylate transport membrane protein TctA, large permease component
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |