Regulon of YdcR in Leptothrix cholodnii SP-6
| Regulator type: | Transcription factor |
| TF locus tag: | Lcho_0726 |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Regulog: | YdcR - Comamonadaceae |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Comamonadaceae
- By TF family - GntR/MocR
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -110
Score: 7.1 Sequence: CGCTGATCCGATCGA-(10)-ATCTGCACCTGACCG
Locus tag: Lcho_1322
Name: COG2863 Funciton: Probable cytochrome c2
Locus tag: Lcho_1321
Name: COG3258 Funciton: Putative diheme cytochrome c-553 |
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COG2863
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Probable cytochrome c2
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COG3258
|
Putative diheme cytochrome c-553
|
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Position: -69
Score: 8.3 Sequence: ATCTGATGCTATCGA-(10)-ATCTGAATCTACCGG
Locus tag: Lcho_0727
Name: Daci_5825 Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Locus tag: Lcho_0728
Name: COG0348 Funciton: Polyferredoxin |
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Daci_5825
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Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
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COG0348
|
Polyferredoxin
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |