Regulon of Daci_0595 in Variovorax paradoxus S110
| Regulator type: | Transcription factor |
| TF locus tag: | Vapar_0748 |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Metabolite transport |
| Effector: | |
| Regulog: | Daci_0595 - Comamonadaceae |
| Statistics of regulated genes: | |
| - Genes | 10 |
| - Operons | 1 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Comamonadaceae
- By TF family - GntR/MocR
- By pathway - Metabolite transport
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -93
Score: 16.4 Sequence: CTTCTGTGTCG-(10)-CAATACAGTTT-(15)-CAACTGTATCG-(0)-GAACTGTAATG
Locus tag: Vapar_0747
Name: PF01810 Funciton: Transporter, LysE family
Locus tag: Vapar_0746
Name: PF00892 Funciton: Permease of the drug/metabolite transporter (DMT) superfamily
Locus tag: Vapar_0745
Name: COG1167 Funciton: Aspartate aminotransferase (AspB-4) (EC 2.6.1.1)
Locus tag: Vapar_0744
Name: Aave_4745 Funciton: ThiJ/PfpI family protein
Locus tag: Vapar_0743
Name: PF01810 Funciton: Transporter, LysE family
Locus tag: Vapar_0742
Name: Bpro_4241 Funciton: Glutathione S-transferase domain protein
Locus tag: Vapar_0741
Name: phzF Funciton: Phenazine biosynthesis protein PhzF
Locus tag: Vapar_0740
Name: Aave_4440 Funciton: Riboflavin-specific deaminase
Locus tag: Vapar_0739
Name: PF01810 Funciton: Transporter, LysE family
Locus tag: Vapar_0738
Name: Aave_4441 Funciton: Pyridoxal-5'-phosphate-dependent enzyme, threonine dehydratase (EC 4.3.1.19) |
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PF01810
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Transporter, LysE family
|
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PF00892
|
Permease of the drug/metabolite transporter (DMT) superfamily
|
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COG1167
|
Aspartate aminotransferase (AspB-4) (EC 2.6.1.1)
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Aave_4745
|
ThiJ/PfpI family protein
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PF01810
|
Transporter, LysE family
|
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Bpro_4241
|
Glutathione S-transferase domain protein
|
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phzF
|
Phenazine biosynthesis protein PhzF
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Aave_4440
|
Riboflavin-specific deaminase
|
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|
PF01810
|
Transporter, LysE family
|
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|
Aave_4441
|
Pyridoxal-5'-phosphate-dependent enzyme, threonine dehydratase (EC 4.3.1.19)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |