Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of GabR in Ralstonia solanacearum GMI1000

Properties
Regulator type: Transcription factor
TF locus tag: RS01853
Regulator family: GntR/MocR
Regulation mode:
Biological process: Gamma-aminobutyrate utilization
Effector: Gamma-aminobutyric acid
Regulog: GabR - Ralstonia
Statistics of regulated genes:
- Genes 6
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 8 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -97
Score: 13.1
Sequence: ATTGGCTC-(15)-ATTGGGTC-(10)-GGGCCAAT
Locus tag: RSc0029
Name: gabT
Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
Locus tag: RSc0028
Name: gabD
Funciton: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)
gabT
Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
gabD
Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)

Position: -131
Score: 12.4
Sequence: AATGGCTC-(15)-ATTGGGTC-(8)-AAGACCAT
Locus tag: RS02922
Name: gbtA
Funciton: Predicted gamma-aminobutyrate ABC transporter, ATP-binding component
Locus tag: RS02921
Name: gbtD
Funciton: Predicted gamma-aminobutyrate ABC transporter, periplasmic binding protein
Locus tag: RS02920
Name: gbtB
Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component
Locus tag: RS02919
Name: gbtC
Funciton: Predicted gamma-aminobutyrate ABC transporter, permease component
gbtA
Predicted gamma-aminobutyrate ABC transporter, ATP-binding component
gbtD
Predicted gamma-aminobutyrate ABC transporter, periplasmic binding protein
gbtB
Predicted gamma-aminobutyrate ABC transporter, permease component
gbtC
Predicted gamma-aminobutyrate ABC transporter, permease component
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