Regulon of GabR in Ralstonia metallidurans CH34
| Regulator type: | Transcription factor |
| TF locus tag: | Rmet_1609 |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Gamma-aminobutyrate utilization |
| Effector: | Gamma-aminobutyric acid |
| Regulog: | GabR - Ralstonia |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 2 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Ralstonia
- By TF family - GntR/MocR
- By effector - Gamma-aminobutyric acid
- By pathway - Gamma-aminobutyrate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -34
Score: 7.1 Sequence: CTTGCTTC-(15)-AGGGATTC-(8)-GGGGCAAG
Locus tag: Rmet_1614
Name: ddpA Funciton: ABC-type peptide transport system, permease component
Locus tag: Rmet_1615
Name: dppB Funciton: ABC-type peptide transport system, permease component
Locus tag: Rmet_1616
Name: dppC Funciton: ABC-type peptide transport system, periplasmic component
Locus tag: Rmet_1617
Name: dppD Funciton: ABC-type peptide transport system, ATP-binding component
Locus tag: Rmet_1618
Name: gabT Funciton: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) |
|||
|
ddpA
|
ABC-type peptide transport system, permease component
|
||
|
dppB
|
ABC-type peptide transport system, permease component
|
||
|
dppC
|
ABC-type peptide transport system, periplasmic component
|
||
|
dppD
|
ABC-type peptide transport system, ATP-binding component
|
||
|
gabT
|
Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
|
||
|
Position: -112
Score: 9 Sequence: AGTGGCTC-(15)-ATATGGAC-(8)-GGTACCAA
Locus tag: Rmet_1610
Name: argE Funciton: Acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase family |
|||
|
argE
|
Acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase family
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |