Regulon of LexA in Mycobacterium marinum M

Properties
Regulator type:	Transcription factor
TF locus tag:	MMAR_1992
Regulator family:	LexA
Regulation mode:	repressor
Biological process:	SOS response
Effector:	DNA damage
Regulog:	LexA - Mycobacteriaceae
Statistics of regulated genes:
- Genes	13
- Operons	9
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 83 sites [see more]

Member of regulog collections

By trascription factor - LexA
By taxonomy - Mycobacteriaceae
By TF family - LexA
By effector - DNA damage
By pathway - SOS response

Regulated operons
	Locus Tag	Name	Function
Position: -28 Score: 5.4 Sequence: TCGAACATATTTTCGA Locus tag: MMAR_1158 Name: dnaE2 Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7)
	MMAR_1158	dnaE2	DNA polymerase III alpha subunit (EC 2.7.7.7)
Position: -8 Score: 5.9 Sequence: TCGAACACATGTTCGA Locus tag: MMAR_1584 Name: Rv3074 Funciton: Conserved hypothetical protein
	MMAR_1584	Rv3074	Conserved hypothetical protein
Position: -8 Score: 5.1 Sequence: TCGAATGTATGTTCGA Locus tag: MMAR_5187 Name: Rv0336 Funciton: Conserved hypothetical protein
	MMAR_5187	Rv0336	Conserved hypothetical protein
Position: -8 Score: 5.2 Sequence: TCGAACTGATGTGCGA Locus tag: MMAR_4493 Name: alkB Funciton: DNA repair system specific for alkylated DNA
	MMAR_4493	alkB	DNA repair system specific for alkylated DNA
Position: -25 Score: 5.4 Sequence: TCGAACTAGTGTTCGA Locus tag: MMAR_2148 Name: splB Funciton: DNA repair photolyase
	MMAR_2148	splB	DNA repair photolyase
Position: -46 Score: 5.3 Sequence: TCGAACAATTGTTCGG Locus tag: MMAR_2109 Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) Locus tag: MMAR_2110 Name: ruvA Funciton: Holliday junction DNA helicase RuvA Locus tag: MMAR_2111 Name: ruvB Funciton: Holliday junction DNA helicase RuvB
	MMAR_2109	ruvC	Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
	MMAR_2110	ruvA	Holliday junction DNA helicase RuvA
	MMAR_2111	ruvB	Holliday junction DNA helicase RuvB
Position: -51 Score: 5.2 Sequence: TCGAACATACTTTCGA Locus tag: MMAR_1150 Name: Rv3395c Funciton: Recombinase-like hypothetical protein Locus tag: MMAR_1151 Name: COG0389 Funciton: DNA polymerase-like protein PA0670
	MMAR_1150	Rv3395c	Recombinase-like hypothetical protein
	MMAR_1151	COG0389	DNA polymerase-like protein PA0670
Position: -121 Score: 5.5 Sequence: TCGAACAGATGTTCGG Locus tag: MMAR_1977 Name: recA Funciton: Recombinase A Locus tag: MMAR_1978 Name: recX Funciton: Regulatory protein RecX
	MMAR_1977	recA	Recombinase A
	MMAR_1978	recX	Regulatory protein RecX
Position: -282 Score: 5.1 Sequence: TCGCTCAAGTGTTCGA Position: -258 Score: 5.2 Sequence: TCGCTCACGTGTTCGA Position: -48 Score: 5.6 Sequence: TCGAACACATGTTTGA Locus tag: MMAR_1992 Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
	MMAR_1992	lexA	SOS-response repressor and protease LexA (EC 3.4.21.88)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of LexA in Mycobacterium marinum M

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --