Regulon of LexA in Mycobacterium flavescens PYR-GCK
| Regulator type: | Transcription factor |
| TF locus tag: | Mflv_3956 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Mycobacteriaceae |
| Statistics of regulated genes: | |
| - Genes | 10 |
| - Operons | 8 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - LexA
- By taxonomy - Mycobacteriaceae
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -70
Score: 4.9 Sequence: TCGAACAAAATTTCGA
Locus tag: Mflv_4899
Name: Rv3395c Funciton: Recombinase-like hypothetical protein
Locus tag: Mflv_4898
Name: COG0389 Funciton: DNA polymerase-like protein PA0670 |
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Rv3395c
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Recombinase-like hypothetical protein
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COG0389
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DNA polymerase-like protein PA0670
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Position: -133
Score: 5.2 Sequence: TCGAACACCTGTTCGT
Locus tag: Mflv_3975
Name: recA Funciton: Recombinase A
Locus tag: Mflv_3974
Name: recX Funciton: Regulatory protein RecX |
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recA
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Recombinase A
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recX
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Regulatory protein RecX
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Position: -8
Score: 5.9 Sequence: TCGAACACATGTTCGA
Locus tag: Mflv_4927
Name: PF02720 Funciton: HNH endonuclease |
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PF02720
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HNH endonuclease
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Position: 1
Score: 5.3 Sequence: TGGAACACATGTTCGA
Locus tag: Mflv_3422
Name: PF02720 Funciton: HNH endonuclease |
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PF02720
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HNH endonuclease
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Position: -64
Score: 5.7 Sequence: TCGAACGGATGTTCGA
Locus tag: Mflv_4893
Name: dnaE2 Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7) |
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dnaE2
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DNA polymerase III alpha subunit (EC 2.7.7.7)
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Position: -29
Score: 5.3 Sequence: TCGAACGCCTGTGCGA
Locus tag: Mflv_1921
Name: alkB Funciton: DNA repair system specific for alkylated DNA |
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alkB
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DNA repair system specific for alkylated DNA
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Position: -128
Score: 5.4 Sequence: TCGATCAGGTGTTCGA
Position: -108
Score: 5.1 Sequence: TAGAACATGTGATCGA
Position: -48
Score: 5.6 Sequence: TCGAACACATGTTTGA
Locus tag: Mflv_3956
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88) |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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Position: -23
Score: 5.1 Sequence: TCGAACGTATGTTCGC
Locus tag: Mflv_3795
Name: splB Funciton: DNA repair photolyase |
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splB
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DNA repair photolyase
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |