Regulon of ModE3 in Leptothrix cholodnii SP-6
| Regulator type: | Transcription factor |
| TF locus tag: | Lcho_1822 |
| Regulator family: | ModE |
| Regulation mode: | repressor (activator) |
| Biological process: | Tungsten homeostasis |
| Effector: | Tungsten |
| Regulog: | ModE3 - Comamonadaceae |
| Statistics of regulated genes: | |
| - Genes | 12 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - ModE
- By taxonomy - Comamonadaceae
- By TF family - ModE
- By effector - Tungsten
- By pathway - Tungsten homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -39
Score: 5.5 Sequence: ATATGCAGGCCTTTGCATGG
Locus tag: Lcho_3729
Name: fdoX Funciton: Putative subunit of formate dehydrogenase
Locus tag: Lcho_3728
Name: fdoG Funciton: Formate dehydrogenase-O, major subunit (EC 1.2.1.2)
Locus tag: Lcho_3727
Name: fdoH Funciton: Formate dehydrogenase-O, iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Lcho_3726
Name: fdoY Funciton: Putative subunit of formate dehydrogenase
Locus tag: Lcho_3725
Name: fdoI Funciton: Formate dehydrogenase-O, gamma subunit (EC 1.2.1.2)
Locus tag: Lcho_3724
Name: fdoZ Funciton: Putative subunit of formate dehydrogenase
Locus tag: Lcho_3723
Name: fdhD Funciton: Formate dehydrogenase chain D (EC 1.2.1.2) |
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fdoX
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Putative subunit of formate dehydrogenase
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fdoG
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Formate dehydrogenase-O, major subunit (EC 1.2.1.2)
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fdoH
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Formate dehydrogenase-O, iron-sulfur subunit (EC 1.2.1.2)
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fdoY
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Putative subunit of formate dehydrogenase
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fdoI
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Formate dehydrogenase-O, gamma subunit (EC 1.2.1.2)
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fdoZ
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Putative subunit of formate dehydrogenase
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fdhD
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Formate dehydrogenase chain D (EC 1.2.1.2)
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Position: -91
Score: 6.2 Sequence: CTATGCAGATGATTGCATAG
Locus tag: Lcho_1816
Name: Ajs_3943 Funciton: NADH-dependent dehydrogenase, iron-sulfur binding protein
Locus tag: Lcho_1817
Name: Ajs_3944 Funciton: Tungsten-containing aldehyde ferredoxin oxidoreductase
Locus tag: Lcho_1818
Name: Ajs_3945 Funciton: NADH-dependent dehydrogenase, NADH-binding subunit
Locus tag: Lcho_1819
Name: Ajs_3946 Funciton: Conserved hypothetical protein
Locus tag: Lcho_1820
Name: Ajs_3947 Funciton: Conserved hypothetical protein |
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Ajs_3943
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NADH-dependent dehydrogenase, iron-sulfur binding protein
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Ajs_3944
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Tungsten-containing aldehyde ferredoxin oxidoreductase
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Ajs_3945
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NADH-dependent dehydrogenase, NADH-binding subunit
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Ajs_3946
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Conserved hypothetical protein
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Ajs_3947
|
Conserved hypothetical protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |