Regulon of FdsR in Pseudomonas mendocina ymp

Properties
Regulator type:	Transcription factor
TF locus tag:	Pmen_0386
Regulator family:	ModE
Regulation mode:	repressor (activator)
Biological process:	Formate oxydation
Effector:	Formate
Regulog:	FdsR - Pseudomonadaceae
Statistics of regulated genes:
- Genes	5
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 4 sites [see more]

Member of regulog collections

By taxonomy - Pseudomonadaceae
By TF family - ModE
By effector - Formate
By pathway - Formate oxydation

Regulated operons
	Locus Tag	Name	Function
Position: -94 Score: 6 Sequence: ATATGAAGTAAAGTTCTTAT Position: -18 Score: 5.6 Sequence: ATATGAATCCTTGAACATAT Locus tag: Pmen_0386 Name: fdsR Funciton: Formate dehydrogenase transcriptional regulator FdsR, ModE family
	Pmen_0386	fdsR	Formate dehydrogenase transcriptional regulator FdsR, ModE family
Position: -200 Score: 5.6 Sequence: ATATGTTCAAGGATTCATAT Position: -124 Score: 6 Sequence: ATAAGAACTTTACTTCATAT Locus tag: Pmen_0387 Name: fdsG Funciton: NAD-dependent formate dehydrogenase (EC 1.2.1.2), gamma subunit Locus tag: Pmen_0388 Name: fdsB Funciton: NAD-dependent formate dehydrogenase (EC 1.2.1.2), beta subunit Locus tag: Pmen_0389 Name: fdsA Funciton: NAD-dependent formate dehydrogenase (EC 1.2.1.2), alpha subunit Locus tag: Pmen_0390 Name: fdsD Funciton: NAD-dependent formate dehydrogenase (EC 1.2.1.2), delta subunit
	Pmen_0387	fdsG	NAD-dependent formate dehydrogenase (EC 1.2.1.2), gamma subunit
	Pmen_0388	fdsB	NAD-dependent formate dehydrogenase (EC 1.2.1.2), beta subunit
	Pmen_0389	fdsA	NAD-dependent formate dehydrogenase (EC 1.2.1.2), alpha subunit
	Pmen_0390	fdsD	NAD-dependent formate dehydrogenase (EC 1.2.1.2), delta subunit

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD