Regulon of NikR in Chlorobium limicola DSM 245

Properties
Regulator type:	Transcription factor
TF locus tag:	Clim_2003
Regulator family:	NikR
Regulation mode:	repressor
Biological process:	Nickel homeostasis
Effector:	Nickel ion, (Ni2+)
Regulog:	NikR - Chlorobiales
Statistics of regulated genes:
- Genes	4
- Operons	1
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 5 sites [see more]

Member of regulog collections

By trascription factor - NikR
By taxonomy - Chlorobiales
By TF family - NikR
By effector - Nickel ion, (Ni2+)
By pathway - Nickel homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -54 Score: 7.8 Sequence: GTAACAC-(13)-GTGCTAC Locus tag: Clim_2004 Name: ompN Funciton: Hypothetical outer membrane porin, nickel regulated Locus tag: Clim_2005 Name: nikMN Funciton: Substrate-specific component NikM of nickel ECF transporter / Additional substrate-specific component NikN of nickel ECF transporter Locus tag: Clim_2006 Name: nikQ Funciton: Transmembrane component NikQ of energizing module of nickel ECF transporter Locus tag: Clim_2007 Name: nikO Funciton: ATPase component NikO of energizing module of nickel ECF transporter
	Clim_2004	ompN	Hypothetical outer membrane porin, nickel regulated
	Clim_2005	nikMN	Substrate-specific component NikM of nickel ECF transporter / Additional substrate-specific component NikN of nickel ECF transporter
	Clim_2006	nikQ	Transmembrane component NikQ of energizing module of nickel ECF transporter
	Clim_2007	nikO	ATPase component NikO of energizing module of nickel ECF transporter

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD