Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of NikR in Chlorobium limicola DSM 245

Properties
Regulator type: Transcription factor
TF locus tag: Clim_2003
Regulator family: NikR
Regulation mode: repressor
Biological process: Nickel homeostasis
Effector: Nickel ion, (Ni2+)
Regulog: NikR - Chlorobiales
Statistics of regulated genes:
- Genes 4
- Operons 1
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 5 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -54
Score: 7.8
Sequence: GTAACAC-(13)-GTGCTAC
Locus tag: Clim_2004
Name: ompN
Funciton: Hypothetical outer membrane porin, nickel regulated
Locus tag: Clim_2005
Name: nikMN
Funciton: Substrate-specific component NikM of nickel ECF transporter / Additional substrate-specific component NikN of nickel ECF transporter
Locus tag: Clim_2006
Name: nikQ
Funciton: Transmembrane component NikQ of energizing module of nickel ECF transporter
Locus tag: Clim_2007
Name: nikO
Funciton: ATPase component NikO of energizing module of nickel ECF transporter
ompN
Hypothetical outer membrane porin, nickel regulated
nikMN
Substrate-specific component NikM of nickel ECF transporter / Additional substrate-specific component NikN of nickel ECF transporter
nikQ
Transmembrane component NikQ of energizing module of nickel ECF transporter
nikO
ATPase component NikO of energizing module of nickel ECF transporter
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD