Regulon of NikR in Chlorobium ferrooxidans DSM 13031
| Regulator type: | Transcription factor |
| TF locus tag: | CferDRAFT_0978 |
| Regulator family: | NikR |
| Regulation mode: | repressor |
| Biological process: | Nickel homeostasis |
| Effector: | Nickel ion, (Ni2+) |
| Regulog: | NikR - Chlorobiales |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 1 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - NikR
- By taxonomy - Chlorobiales
- By TF family - NikR
- By effector - Nickel ion, (Ni2+)
- By pathway - Nickel homeostasis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -75
Score: 7.8 Sequence: GTAACAC-(13)-GTGCTAT
Locus tag: CferDRAFT_0979
Name: ompN Funciton: Hypothetical outer membrane porin, nickel regulated
Locus tag: CferDRAFT_0980
Name: nikMN Funciton: Substrate-specific component NikM of nickel ECF transporter / Additional substrate-specific component NikN of nickel ECF transporter
Locus tag: CferDRAFT_0981
Name: nikQ Funciton: Transmembrane component NikQ of energizing module of nickel ECF transporter
Locus tag: CferDRAFT_0982
Name: nikO Funciton: ATPase component NikO of energizing module of nickel ECF transporter |
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ompN
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Hypothetical outer membrane porin, nickel regulated
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nikMN
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Substrate-specific component NikM of nickel ECF transporter / Additional substrate-specific component NikN of nickel ECF transporter
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nikQ
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Transmembrane component NikQ of energizing module of nickel ECF transporter
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nikO
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ATPase component NikO of energizing module of nickel ECF transporter
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |