Regulon of PA1520 in Pseudomonas putida KT2440
| Regulator type: | Transcription factor |
| TF locus tag: | PP4283 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Xanthine utilization; Allantoin utilization |
| Effector: | |
| Regulog: | PA1520 - Pseudomonadaceae |
| Statistics of regulated genes: | |
| - Genes | 18 |
| - Operons | 8 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Pseudomonadaceae
- By TF family - GntR/Others
- By pathway - Xanthine utilization
- By pathway - Allantoin utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -427
Score: 4.8 Sequence: TTGTACACAA
Position: -166
Score: 4.7 Sequence: TTGTATACAA
Locus tag: PP4309
Name: PA0476 Funciton: Hydantoin permease
Locus tag: PP4310
Name: PSEEN1659 Funciton: Hydantoin racemase (EC 5.1.99.-) |
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PA0476
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Hydantoin permease
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PSEEN1659
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Hydantoin racemase (EC 5.1.99.-)
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Position: -175
Score: 4.7 Sequence: TTGTATACAA
Position: -35
Score: 4.7 Sequence: TTGTATACAA
Locus tag: PP4297
Name: gcl Funciton: Glyoxylate carboligase (EC 4.1.1.47)
Locus tag: PP4298
Name: hyi Funciton: Hydroxypyruvate isomerase (EC 5.3.1.22)
Locus tag: PP4299
Name: garR Funciton: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) |
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gcl
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Glyoxylate carboligase (EC 4.1.1.47)
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hyi
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Hydroxypyruvate isomerase (EC 5.3.1.22)
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garR
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2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
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Position: -144
Score: 4.8 Sequence: TTGTGTACAA
Position: -45
Score: 4.6 Sequence: CTGTGTACAA
Locus tag: PP4283
Name: PA1520 Funciton: Transcriptional regulator, GntR family |
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PA1520
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Transcriptional regulator, GntR family
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Position: -323
Score: 4.7 Sequence: TTGTATACAA
Position: -118
Score: 4.8 Sequence: TTGTGTACAA
Locus tag: PP4285
Name: PA1518 Funciton: 5-hydroxyisourate hydrolase |
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PA1518
|
5-hydroxyisourate hydrolase
|
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Position: -291
Score: 4.8 Sequence: TTGTACACAA
Position: -86
Score: 4.7 Sequence: TTGTATACAA
Locus tag: PP4286
Name: PA1517 Funciton: putative uricase
Locus tag: PP4287
Name: uraO Funciton: Urate oxidase (EC 1.7.3.3)
Locus tag: PP4288
Name: allA Funciton: Ureidoglycolate hydrolase (EC 3.5.3.19)
Locus tag: PP4289
Name: PA1513 Funciton: conserved hypothetical membrane protein, paralogue of Y20848
Locus tag: PP4290
Name: PA1507 Funciton: Xanthine/uracil permease
Locus tag: PP4291
Name: null Funciton: Nucleoside-binding outer membrane protein
Locus tag: PP4292
Name: null Funciton: hypothetical protein
Locus tag: PP4293
Name: PSEEN1679 Funciton: Nucleoside-binding outer membrane protein |
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PA1517
|
putative uricase
|
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uraO
|
Urate oxidase (EC 1.7.3.3)
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allA
|
Ureidoglycolate hydrolase (EC 3.5.3.19)
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PA1513
|
conserved hypothetical membrane protein, paralogue of Y20848
|
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PA1507
|
Xanthine/uracil permease
|
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Nucleoside-binding outer membrane protein
|
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hypothetical protein
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PSEEN1679
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Nucleoside-binding outer membrane protein
|
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Position: -181
Score: 4.3 Sequence: TTGTACACAC
Position: -78
Score: 4.7 Sequence: TTGTATACAA
Locus tag: PP4643
Name: PA2938 Funciton: Xanthine/uracil permease family protein |
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PA2938
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Xanthine/uracil permease family protein
|
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Position: -232
Score: 4.7 Sequence: TTGTATACAA
Position: -92
Score: 4.7 Sequence: TTGTATACAA
Locus tag: PP4296
Name: PA1503 Funciton: GlcG protein |
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PA1503
|
GlcG protein
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Position: -245
Score: 4.6 Sequence: TTGTACACAG
Position: -146
Score: 4.8 Sequence: TTGTACACAA
Locus tag: PP4284
Name: PA1519 Funciton: Xanthine/uracil/thiamine/ascorbate permease family protein |
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PA1519
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Xanthine/uracil/thiamine/ascorbate permease family protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |