Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PA1520 in Pseudomonas putida KT2440

Properties
Regulator type: Transcription factor
TF locus tag: PP4283
Regulator family: GntR/Others
Regulation mode:
Biological process: Xanthine utilization; Allantoin utilization
Effector:
Regulog: PA1520 - Pseudomonadaceae
Statistics of regulated genes:
- Genes 18
- Operons 8
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 100 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -427
Score: 4.8
Sequence: TTGTACACAA
Position: -166
Score: 4.7
Sequence: TTGTATACAA
Locus tag: PP4309
Name: PA0476
Funciton: Hydantoin permease
Locus tag: PP4310
Name: PSEEN1659
Funciton: Hydantoin racemase (EC 5.1.99.-)
PP4309
PA0476
Hydantoin permease
PP4310
PSEEN1659
Hydantoin racemase (EC 5.1.99.-)
Position: -175
Score: 4.7
Sequence: TTGTATACAA
Position: -35
Score: 4.7
Sequence: TTGTATACAA
Locus tag: PP4297
Name: gcl
Funciton: Glyoxylate carboligase (EC 4.1.1.47)
Locus tag: PP4298
Name: hyi
Funciton: Hydroxypyruvate isomerase (EC 5.3.1.22)
Locus tag: PP4299
Name: garR
Funciton: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
PP4297
gcl
Glyoxylate carboligase (EC 4.1.1.47)
PP4298
hyi
Hydroxypyruvate isomerase (EC 5.3.1.22)
PP4299
garR
2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
Position: -144
Score: 4.8
Sequence: TTGTGTACAA
Position: -45
Score: 4.6
Sequence: CTGTGTACAA
Locus tag: PP4283
Name: PA1520
Funciton: Transcriptional regulator, GntR family
PP4283
PA1520
Transcriptional regulator, GntR family
Position: -323
Score: 4.7
Sequence: TTGTATACAA
Position: -118
Score: 4.8
Sequence: TTGTGTACAA
Locus tag: PP4285
Name: PA1518
Funciton: 5-hydroxyisourate hydrolase
PP4285
PA1518
5-hydroxyisourate hydrolase
Position: -291
Score: 4.8
Sequence: TTGTACACAA
Position: -86
Score: 4.7
Sequence: TTGTATACAA
Locus tag: PP4286
Name: PA1517
Funciton: putative uricase
Locus tag: PP4287
Name: uraO
Funciton: Urate oxidase (EC 1.7.3.3)
Locus tag: PP4288
Name: allA
Funciton: Ureidoglycolate hydrolase (EC 3.5.3.19)
Locus tag: PP4289
Name: PA1513
Funciton: conserved hypothetical membrane protein, paralogue of Y20848
Locus tag: PP4290
Name: PA1507
Funciton: Xanthine/uracil permease
Locus tag: PP4291
Name: null
Funciton: Nucleoside-binding outer membrane protein
Locus tag: PP4292
Name: null
Funciton: hypothetical protein
Locus tag: PP4293
Name: PSEEN1679
Funciton: Nucleoside-binding outer membrane protein
PP4286
PA1517
putative uricase
PP4287
uraO
Urate oxidase (EC 1.7.3.3)
PP4288
allA
Ureidoglycolate hydrolase (EC 3.5.3.19)
PP4289
PA1513
conserved hypothetical membrane protein, paralogue of Y20848
PP4290
PA1507
Xanthine/uracil permease
PP4291
Nucleoside-binding outer membrane protein
PP4292
hypothetical protein
PP4293
PSEEN1679
Nucleoside-binding outer membrane protein
Position: -181
Score: 4.3
Sequence: TTGTACACAC
Position: -78
Score: 4.7
Sequence: TTGTATACAA
Locus tag: PP4643
Name: PA2938
Funciton: Xanthine/uracil permease family protein
PP4643
PA2938
Xanthine/uracil permease family protein
Position: -232
Score: 4.7
Sequence: TTGTATACAA
Position: -92
Score: 4.7
Sequence: TTGTATACAA
Locus tag: PP4296
Name: PA1503
Funciton: GlcG protein
PP4296
PA1503
GlcG protein
Position: -245
Score: 4.6
Sequence: TTGTACACAG
Position: -146
Score: 4.8
Sequence: TTGTACACAA
Locus tag: PP4284
Name: PA1519
Funciton: Xanthine/uracil/thiamine/ascorbate permease family protein
PP4284
PA1519
Xanthine/uracil/thiamine/ascorbate permease family protein
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