Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PA1520 in Pseudomonas fluorescens Pf-5

Properties
Regulator type: Transcription factor
TF locus tag: PFL_1883
Regulator family: GntR/Others
Regulation mode:
Biological process: Xanthine utilization; Allantoin utilization
Effector:
Regulog: PA1520 - Pseudomonadaceae
Statistics of regulated genes:
- Genes 16
- Operons 8
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 100 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -146
Score: 4.7
Sequence: TTGTATACAA
Locus tag: PFL_4364
Name: PA1519
Funciton: Xanthine/uracil/thiamine/ascorbate permease family protein
PFL_4364
PA1519
Xanthine/uracil/thiamine/ascorbate permease family protein
Position: -104
Score: 4.8
Sequence: TTGTGTACAA
Locus tag: PFL_1883
Name: PA1520
Funciton: Transcriptional regulator, GntR family
PFL_1883
PA1520
Transcriptional regulator, GntR family
Position: -175
Score: 4.7
Sequence: TTGTATACAA
Position: -36
Score: 4.7
Sequence: TTGTATACAA
Locus tag: PFL_1701
Name: gcl
Funciton: Glyoxylate carboligase (EC 4.1.1.47)
Locus tag: PFL_1700
Name: hyi
Funciton: Hydroxypyruvate isomerase (EC 5.3.1.22)
Locus tag: PFL_1699
Name: garR
Funciton: 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
PFL_1701
gcl
Glyoxylate carboligase (EC 4.1.1.47)
PFL_1700
hyi
Hydroxypyruvate isomerase (EC 5.3.1.22)
PFL_1699
garR
2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
Position: -337
Score: 4.7
Sequence: TTGTATACAA
Position: -142
Score: 4.8
Sequence: TTGTGTACAA
Locus tag: PFL_4365
Name: PA1518
Funciton: 5-hydroxyisourate hydrolase
PFL_4365
PA1518
5-hydroxyisourate hydrolase
Position: -291
Score: 4.8
Sequence: TTGTACACAA
Position: -96
Score: 4.7
Sequence: TTGTATACAA
Locus tag: PFL_4366
Name: PA1517
Funciton: putative uricase
Locus tag: PFL_4367
Name: uraO
Funciton: Urate oxidase (EC 1.7.3.3)
Locus tag: PFL_4368
Name: alc
Funciton: Allantoicase (EC 3.5.3.4)
Locus tag: PFL_4369
Name: allA
Funciton: Ureidoglycolate hydrolase (EC 3.5.3.19)
Locus tag: PFL_4370
Name: PA1513
Funciton: conserved hypothetical membrane protein, paralogue of Y20848
Locus tag: PFL_4371
Name: PA1507
Funciton: Xanthine/uracil permease
PFL_4366
PA1517
putative uricase
PFL_4367
uraO
Urate oxidase (EC 1.7.3.3)
PFL_4368
alc
Allantoicase (EC 3.5.3.4)
PFL_4369
allA
Ureidoglycolate hydrolase (EC 3.5.3.19)
PFL_4370
PA1513
conserved hypothetical membrane protein, paralogue of Y20848
PFL_4371
PA1507
Xanthine/uracil permease
Position: -161
Score: 4.7
Sequence: TTGTATACAA
Position: -22
Score: 4.7
Sequence: TTGTATACAA
Locus tag: PFL_1702
Name: PA1503
Funciton: GlcG protein
PFL_1702
PA1503
GlcG protein
Position: 12
Score: 4.1
Sequence: ATGTGTACAA
Locus tag: PFL_2039
Name: PA2938
Funciton: Xanthine/uracil permease family protein
PFL_2039
PA2938
Xanthine/uracil permease family protein
Position: -428
Score: 4.6
Sequence: CTGTACACAA
Position: -168
Score: 4.7
Sequence: TTGTATACAA
Locus tag: PFL_1853
Name: PA0476
Funciton: Hydantoin permease
Locus tag: PFL_1852
Name: PSEEN1659
Funciton: Hydantoin racemase (EC 5.1.99.-)
PFL_1853
PA0476
Hydantoin permease
PFL_1852
PSEEN1659
Hydantoin racemase (EC 5.1.99.-)
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