Regulon of ELI_12480 in Sphingopyxis alaskensis RB2256
| Regulator type: | Transcription factor |
| TF locus tag: | Sala_0952 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Multidrug resistance; Multidrug efflux |
| Effector: | |
| Regulog: | ELI_12480 - Sphingomonadales |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 4 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Sphingomonadales
- By TF family - GntR/Others
- By pathway - Multidrug resistance
- By pathway - Multidrug efflux
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -100
Score: 4.9 Sequence: CGGTGATTTAATTAGGTAATACACCT
Locus tag: Sala_0471
Name: rndA Funciton: RND family efflux transporter MFP subunit
Locus tag: Sala_0472
Name: rndB Funciton: RND multidrug efflux transporter transmembrane subunit
Locus tag: Sala_0473
Name: COG2733 Funciton: Predicted membrane protein |
|||
|
rndA
|
RND family efflux transporter MFP subunit
|
||
|
rndB
|
RND multidrug efflux transporter transmembrane subunit
|
||
|
COG2733
|
Predicted membrane protein
|
||
|
Position: -85
Score: 4.7 Sequence: CAGTGTAATGCTTGTATAATACAGTG
Locus tag: Sala_2308
Name: ELI_11155 Funciton: Uncharacterized protein involved in tellurite resistance
Locus tag: Sala_2309
Name: ELI_11160 Funciton: hypothetical protein |
|||
|
ELI_11155
|
Uncharacterized protein involved in tellurite resistance
|
||
|
ELI_11160
|
hypothetical protein
|
||
|
Position: -25
Score: 4.7 Sequence: TGCTGTCTTATGGCATTAAGTCGCCA
Locus tag: Sala_0952
Name: ELI_12480 Funciton: Transcriptional regulator, GntR family |
|||
|
ELI_12480
|
Transcriptional regulator, GntR family
|
||
|
Position: 1
Score: 3.8 Sequence: TGCTGTGTTGGGGTTGTAATACGGCC
Locus tag: Sala_1453
Name: pbp Funciton: penicillin-binding protein |
|||
|
pbp
|
penicillin-binding protein
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |