Regulon of IolR in Nakamurella multipartita DSM 44233
| Regulator type: | Transcription factor |
| TF locus tag: | Namu_4543 |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Inositol utilization |
| Effector: | |
| Regulog: | IolR - Frankineae/Propionibacterineae/Pseudonocardiaceae |
| Statistics of regulated genes: | |
| - Genes | 15 |
| - Operons | 7 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Frankineae/Propionibacterineae/Pseudonocardiaceae
- By TF family - GntR/Others
- By pathway - Inositol utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -60
Score: 4.6 Sequence: ATGATGTCAGGACATTTG
Locus tag: Namu_5196
Name: iolY Funciton: Inositol 2-dehydrogenase |
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iolY
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Inositol 2-dehydrogenase
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Position: -348
Score: 5.1 Sequence: AGAATGTCAGAACAAAGT
Locus tag: Namu_4537
Name: iolTA Funciton: Inositol ABC transport system sugar-binding protein
Locus tag: Namu_4536
Name: iolTB Funciton: Inositol ABC transport system permease protein
Locus tag: Namu_4535
Name: iolTC Funciton: Inositol ABC transport system ATP-binding protein
Locus tag: Namu_4534
Name: iolG Funciton: Myo-inositol 2-dehydrogenase (EC 1.1.1.18) |
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iolTA
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Inositol ABC transport system sugar-binding protein
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iolTB
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Inositol ABC transport system permease protein
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iolTC
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Inositol ABC transport system ATP-binding protein
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iolG
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Myo-inositol 2-dehydrogenase (EC 1.1.1.18)
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Position: -74
Score: 4.9 Sequence: AGTTTGTCTTGACAAGTG
Locus tag: Namu_1848
Name: iolG4 Funciton: Inositol 2-dehydrogenase |
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iolG4
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Inositol 2-dehydrogenase
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Position: -57
Score: 5.3 Sequence: ACTTTGTCAGGACAAGCT
Locus tag: Namu_3353
Name: iolG2 Funciton: Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18)
Locus tag: Namu_3352
Name: iolE Funciton: Inosose dehydratase (EC 4.2.1.44) |
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iolG2
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Myo-inositol 2-dehydrogenase 1 (EC 1.1.1.18)
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iolE
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Inosose dehydratase (EC 4.2.1.44)
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Position: -143
Score: 4.2 Sequence: TATATGTCCTATCAAAGT
Locus tag: Namu_4542
Name: iolC Funciton: 5-keto-2-deoxygluconokinase (EC 2.7.1.92)
Locus tag: Namu_4541
Name: iolJ Funciton: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29)
Locus tag: Namu_4540
Name: iolB Funciton: 5-deoxy-glucuronate isomerase (EC 5.3.1.-)
Locus tag: Namu_4539
Name: iolD Funciton: Epi-inositol hydrolase (EC 3.7.1.-)
Locus tag: Namu_4538
Name: iolA Funciton: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) |
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iolC
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5-keto-2-deoxygluconokinase (EC 2.7.1.92)
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iolJ
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5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29)
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iolB
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5-deoxy-glucuronate isomerase (EC 5.3.1.-)
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iolD
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Epi-inositol hydrolase (EC 3.7.1.-)
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iolA
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Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27)
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Position: -121
Score: 5.3 Sequence: AGCTTGTCCTGACAAAGT
Locus tag: Namu_3354
Name: iolR2 Funciton: Transcriptional regulator for inositol utilization, LacI family |
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iolR2
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Transcriptional regulator for inositol utilization, LacI family
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Position: -79
Score: 4.2 Sequence: ACTTTGATAGGACATATA
Locus tag: Namu_4543
Name: iolR3 Funciton: Inositol utilization transcriptional regulator, GntR family |
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iolR3
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Inositol utilization transcriptional regulator, GntR family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |