Regulon of ScrR in Novosphingobium aromaticivorans DSM 12444
| Regulator type: | Transcription factor |
| TF locus tag: | Saro_1880 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Sucrose utilization |
| Effector: | Sucrose |
| Regulog: | ScrR - Sphingomonadales |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 3 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Sphingomonadales
- By TF family - LacI
- By effector - Sucrose
- By pathway - Sucrose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -106
Score: 5.7 Sequence: CGATGCAATCGATTGCTAAA
Position: -83
Score: 5.8 Sequence: CATTGCAAACGATTGTATGG
Locus tag: Saro_1881
Name: omp(Scr) Funciton: Predicted sucrose-specific TonB-dependent receptor |
|||
|
omp(Scr)
|
Predicted sucrose-specific TonB-dependent receptor
|
||
|
Position: -200
Score: 5.8 Sequence: CCATACAATCGTTTGCAATG
Position: -177
Score: 5.7 Sequence: TTTAGCAATCGATTGCATCG
Locus tag: Saro_1880
Name: scrR Funciton: Sucrose utilization transcriptional regulator ScrR, LacI family |
|||
|
scrR
|
Sucrose utilization transcriptional regulator ScrR, LacI family
|
||
|
Position: -84
Score: 5.3 Sequence: TTATGCAATCGATTGTTGTC
Locus tag: Saro_1877
Name: scrT Funciton: Predicted sucrose transporter, MelB family
Locus tag: Saro_1878
Name: COG3345 Funciton: Alpha-galactosidase (EC 3.2.1.22)
Locus tag: Saro_1879
Name: sacB Funciton: Levansucrase (EC 2.4.1.10) |
|||
|
scrT
|
Predicted sucrose transporter, MelB family
|
||
|
COG3345
|
Alpha-galactosidase (EC 3.2.1.22)
|
||
|
sacB
|
Levansucrase (EC 2.4.1.10)
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |