Regulon of Daci_3836 in Leptothrix cholodnii SP-6

Properties
Regulator type:	Transcription factor
TF locus tag:	Lcho_3020
Regulator family:	GntR/Others
Regulation mode:
Biological process:
Effector:
Regulog:	Daci_3836 - Comamonadaceae
Statistics of regulated genes:
- Genes	12
- Operons	1
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 8 sites [see more]

Member of regulog collections

By taxonomy - Comamonadaceae
By TF family - GntR/Others

Regulated operons
	Locus Tag	Name	Function
Position: 13 Score: 4.7 Sequence: TGTTGTATACCAGT Locus tag: Lcho_3031 Name: uahA Funciton: Allophanate hydrolase (EC 3.5.1.54) Locus tag: Lcho_3030 Name: null Funciton: hypothetical protein Locus tag: Lcho_3029 Name: null Funciton: hypothetical protein Locus tag: Lcho_3028 Name: gatA Funciton: amidase AtzE family Locus tag: Lcho_3027 Name: Lcho_3027 Funciton: putative protein for oxalurate utilization Locus tag: Lcho_3026 Name: Lcho_3026 Funciton: ABC transporter, periplasmic ligand binding protein, Bmp family Locus tag: Lcho_3025 Name: Lcho_3025 Funciton: ABC transporter, permease protein Locus tag: Lcho_3024 Name: Lcho_3024 Funciton: ABC transporter, permease protein Locus tag: Lcho_3023 Name: Lcho_3023 Funciton: Isochorismatase hydrolase (EC 3.3.2.1) Locus tag: Lcho_3022 Name: Lcho_3022 Funciton: ABC transporter ATP-binding protein Locus tag: Lcho_3021 Name: Lcho_3021 Funciton: Isochorismatase hydrolase (EC 3.3.2.1) Locus tag: Lcho_3020 Name: Daci_3836 Funciton: Transcriptional regulator, GntR family
	Lcho_3031	uahA	Allophanate hydrolase (EC 3.5.1.54)
	Lcho_3030		hypothetical protein
	Lcho_3029		hypothetical protein
	Lcho_3028	gatA	amidase AtzE family
	Lcho_3027	Lcho_3027	putative protein for oxalurate utilization
	Lcho_3026	Lcho_3026	ABC transporter, periplasmic ligand binding protein, Bmp family
	Lcho_3025	Lcho_3025	ABC transporter, permease protein
	Lcho_3024	Lcho_3024	ABC transporter, permease protein
	Lcho_3023	Lcho_3023	Isochorismatase hydrolase (EC 3.3.2.1)
	Lcho_3022	Lcho_3022	ABC transporter ATP-binding protein
	Lcho_3021	Lcho_3021	Isochorismatase hydrolase (EC 3.3.2.1)
	Lcho_3020	Daci_3836	Transcriptional regulator, GntR family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD