Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of HexR in Shewanella denitrificans OS217

Properties
Regulator type: Transcription factor
TF locus tag: Sden_2080
Regulator family: RpiR
Regulation mode: repressor (activator)
Biological process: Central carbohydrate metabolism
Effector: 2-keto-3-deoxy-6-phosphogluconate
Regulog: HexR - Shewanellaceae
Statistics of regulated genes:
- Genes 17
- Operons 12
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 316 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -63
Score: 4.4
Sequence: TGGTAATTTTACAACTA
Locus tag: Sden_1791
Name: gapA2
Funciton: glyceraldehyde-3-phosphate dehydrogenase, type I
Sden_1791
gapA2
glyceraldehyde-3-phosphate dehydrogenase, type I
Position: -148
Score: 4.2
Sequence: TTGCAATTATTTTTCAT
Locus tag: Sden_1023
Name: nupC
Funciton: nucleoside transporter, NupC family
Sden_1023
nupC
nucleoside transporter, NupC family
Position: -303
Score: 4.5
Sequence: TTGTAATTTTAGTACGG
Locus tag: Sden_1245
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Sden_1246
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
Sden_1245
aceB
Malate synthase (EC 2.3.3.9)
Sden_1246
aceA
Isocitrate lyase (EC 4.1.3.1)
Position: -249
Score: 5
Sequence: TTGTAATATAACAACAG
Locus tag: Sden_2080
Name: hexR
Funciton: Central carbohydrate metabolism transcription regulator HexR, RpiR family
Sden_2080
hexR
Central carbohydrate metabolism transcription regulator HexR, RpiR family
Position: -260
Score: 4.2
Sequence: TAGTTGTTTTATTACCT
Position: -88
Score: 5
Sequence: CTGTTGTTATATTACAA
Locus tag: Sden_2079
Name: zwf
Funciton: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Locus tag: Sden_2078
Name: pgl
Funciton: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
Locus tag: Sden_2077
Name: edd
Funciton: Phosphogluconate dehydratase (EC 4.2.1.12)
Locus tag: Sden_2076
Name: eda
Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
Sden_2079
zwf
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Sden_2078
pgl
6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
Sden_2077
edd
Phosphogluconate dehydratase (EC 4.2.1.12)
Sden_2076
eda
2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
Position: -72
Score: 5.3
Sequence: TCGTAATTAAATTACAA
Locus tag: Sden_2731
Name: phk
Funciton: Xylulose-5-phosphate phosphoketolase (EC 4.1.2.9)
Sden_2731
phk
Xylulose-5-phosphate phosphoketolase (EC 4.1.2.9)
Position: -94
Score: 5
Sequence: TGGTAATTTATTTACAA
Locus tag: Sden_2734
Name: tal
Funciton: transaldolase
Locus tag: Sden_2735
Name: pgi
Funciton: Glucose-6-phosphate isomerase (EC 5.3.1.9)
Sden_2734
tal
transaldolase
Sden_2735
pgi
Glucose-6-phosphate isomerase (EC 5.3.1.9)
Position: -112
Score: 5.5
Sequence: TAGTAATAAAATTACAA
Locus tag: Sden_2009
Name: ppsA
Funciton: Phosphoenolpyruvate synthase (EC 2.7.9.2)
Sden_2009
ppsA
Phosphoenolpyruvate synthase (EC 2.7.9.2)
Position: -181
Score: 5.1
Sequence: ATCTAATAAAATTACAT
Locus tag: Sden_1793
Name: gapB
Funciton: NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
Sden_1793
gapB
NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
Position: -136
Score: 5.4
Sequence: CTGTAATTAAATTACAG
Locus tag: Sden_2000
Name: adhE
Funciton: Alcohol dehydrogenase (EC 1.1.1.1)
Sden_2000
adhE
Alcohol dehydrogenase (EC 1.1.1.1)
Position: -150
Score: 4.2
Sequence: ATGTAATCAAACTAGAG
Locus tag: Sden_2288
Name: cdd
Funciton: cytidine deaminase
Sden_2288
cdd
cytidine deaminase
Position: -163
Score: 5
Sequence: TTGTAACTTTACTACAT
Locus tag: Sden_2081
Name: pykA
Funciton: Pyruvate kinase (EC 2.7.1.40)
Sden_2081
pykA
Pyruvate kinase (EC 2.7.1.40)
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