Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of HexR in Shewanella baltica OS155

Properties
Regulator type: Transcription factor
TF locus tag: Sbal_2242
Regulator family: RpiR
Regulation mode: repressor (activator)
Biological process: Central carbohydrate metabolism
Effector: 2-keto-3-deoxy-6-phosphogluconate
Regulog: HexR - Shewanellaceae
Statistics of regulated genes:
- Genes 32
- Operons 18
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 316 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -176
Score: 5.3
Sequence: GTGTAATTTAATTACAT
Position: -148
Score: 4.3
Sequence: AATTAAAAAAATTACAA
Position: -124
Score: 5.5
Sequence: TTGTAATAAAACTACAA
Locus tag: Sbal_0942
Name: SO1118
Funciton: hypothetical protein
Sbal_0942
SO1118
hypothetical protein
Position: -181
Score: 5.2
Sequence: TTCTAATAAAATTACAG
Locus tag: Sbal_2216
Name: gapB
Funciton: NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
Sbal_2216
gapB
NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
Position: -23
Score: 4.4
Sequence: TTGTTAATAAATTAGAC
Locus tag: Sbal_0193
Name: mcp1
Funciton: methyl-accepting chemotaxis protein
Sbal_0193
mcp1
methyl-accepting chemotaxis protein
Position: -359
Score: 4.7
Sequence: TGGTAATTTAATTACGT
Locus tag: Sbal_1316
Name: aceB
Funciton: Malate synthase (EC 2.3.3.9)
Locus tag: Sbal_1317
Name: aceA
Funciton: Isocitrate lyase (EC 4.1.3.1)
Sbal_1316
aceB
Malate synthase (EC 2.3.3.9)
Sbal_1317
aceA
Isocitrate lyase (EC 4.1.3.1)
Position: -135
Score: 5
Sequence: GTGTAGTTTTATTACAT
Locus tag: Sbal_1922
Name: adhE
Funciton: Alcohol dehydrogenase (EC 1.1.1.1)
Sbal_1922
adhE
Alcohol dehydrogenase (EC 1.1.1.1)
Position: -125
Score: 4.4
Sequence: TTGAAATTAAACTCCAA
Locus tag: Sbal_3229
Name: nupC
Funciton: nucleoside transporter, NupC family
Sbal_3229
nupC
nucleoside transporter, NupC family
Position: -57
Score: 5.1
Sequence: TTGTAACAAAATTACTA
Locus tag: Sbal_1694
Name: cdd
Funciton: cytidine deaminase
Sbal_1694
cdd
cytidine deaminase
Position: -86
Score: 4.9
Sequence: TTGTAATATTGCTACAG
Locus tag: Sbal_3226
Name: deoA
Funciton: Thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Sbal_3225
Name: deoB
Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: Sbal_3224
Name: deoD
Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1)
Sbal_3226
deoA
Thymidine phosphorylase (EC 2.4.2.4)
Sbal_3225
deoB
Phosphopentomutase (EC 5.4.2.7)
Sbal_3224
deoD
Purine nucleoside phosphorylase (EC 2.4.2.1)
Position: -82
Score: 5
Sequence: TGGTAATTAAGTTACAA
Locus tag: Sbal_2824
Name: gnd
Funciton: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
Sbal_2824
gnd
6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
Position: -182
Score: 5
Sequence: TTGTTATAAAACTACAT
Locus tag: Sbal_0754
Name: nqrA
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Locus tag: Sbal_0755
Name: nqrB
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Locus tag: Sbal_0756
Name: nqrC
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Locus tag: Sbal_0757
Name: nqrD
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Locus tag: Sbal_0758
Name: nqrE
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Locus tag: Sbal_0759
Name: nqrF
Funciton: NADH:ubiquinone oxidoreductase, Na translocating, beta subunit
Sbal_0754
nqrA
NADH:ubiquinone oxidoreductase, Na translocating, alpha subunit
Sbal_0755
nqrB
NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrB
Sbal_0756
nqrC
NADH:ubiquinone oxidoreductase, Na translocating, gamma subunit
Sbal_0757
nqrD
NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrD
Sbal_0758
nqrE
NADH:ubiquinone oxidoreductase, Na translocating, hydrophobic membrane protein NqrE
Sbal_0759
nqrF
NADH:ubiquinone oxidoreductase, Na translocating, beta subunit
Position: -372
Score: 5.1
Sequence: ATGTAAAAAAATTACAT
Locus tag: Sbal_0617
Name: gcvT
Funciton: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Locus tag: Sbal_0618
Name: gcvH
Funciton: Glycine cleavage system H protein
Locus tag: Sbal_0619
Name: gcvP
Funciton: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Sbal_0617
gcvT
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
Sbal_0618
gcvH
Glycine cleavage system H protein
Sbal_0619
gcvP
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Position: -103
Score: 5.3
Sequence: TTGTAATTTTTTTACAT
Locus tag: Sbal_1044
Name: tal
Funciton: transaldolase
Locus tag: Sbal_1043
Name: pgi
Funciton: Glucose-6-phosphate isomerase (EC 5.3.1.9)
Sbal_1044
tal
transaldolase
Sbal_1043
pgi
Glucose-6-phosphate isomerase (EC 5.3.1.9)
Position: -79
Score: 5
Sequence: CTGTTGTTATATTACAA
Locus tag: Sbal_2241
Name: zwf
Funciton: Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Locus tag: Sbal_2240
Name: pgl
Funciton: 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
Locus tag: Sbal_2239
Name: edd
Funciton: Phosphogluconate dehydratase (EC 4.2.1.12)
Locus tag: Sbal_2238
Name: eda
Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
Sbal_2241
zwf
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
Sbal_2240
pgl
6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type
Sbal_2239
edd
Phosphogluconate dehydratase (EC 4.2.1.12)
Sbal_2238
eda
2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
Position: -77
Score: 5
Sequence: TTGTAACTTTACTACAT
Locus tag: Sbal_2243
Name: pykA
Funciton: Pyruvate kinase (EC 2.7.1.40)
Sbal_2243
pykA
Pyruvate kinase (EC 2.7.1.40)
Position: -250
Score: 5
Sequence: TTGTAATATAACAACAG
Locus tag: Sbal_2242
Name: hexR
Funciton: Central carbohydrate metabolism transcription regulator HexR, RpiR family
Sbal_2242
hexR
Central carbohydrate metabolism transcription regulator HexR, RpiR family
Position: -49
Score: 4.6
Sequence: TGGTAATTTTACTACCA
Locus tag: Sbal_2218
Name: gapA2
Funciton: glyceraldehyde-3-phosphate dehydrogenase, type I
Sbal_2218
gapA2
glyceraldehyde-3-phosphate dehydrogenase, type I
Position: -112
Score: 5.5
Sequence: TAGTAATAAAATTACAA
Locus tag: Sbal_2488
Name: ppsA
Funciton: Phosphoenolpyruvate synthase (EC 2.7.9.2)
Sbal_2488
ppsA
Phosphoenolpyruvate synthase (EC 2.7.9.2)
Position: -74
Score: 5.5
Sequence: TTGTAATAAAACTACAA
Locus tag: Sbal_1046
Name: phk
Funciton: Xylulose-5-phosphate phosphoketolase (EC 4.1.2.9)
Sbal_1046
phk
Xylulose-5-phosphate phosphoketolase (EC 4.1.2.9)
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