Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of pRL90265 in Sinorhizobium meliloti 1021

Properties
Regulator type: Transcription factor
TF locus tag: SMb20154
Regulator family: LacI
Regulation mode:
Biological process: Sugar utilization
Effector:
Regulog: pRL90265 - Rhizobiales
Statistics of regulated genes:
- Genes 10
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 8 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -350
Score: 5.5
Sequence: AACTGAACACGTGTGCGTAT
Position: -298
Score: 5.7
Sequence: GATTGCTCACGTGTGCATTT
Locus tag: SMb20155
Name: SMb20155
Funciton: putative ABC transporter permease protein
Locus tag: SMb20156
Name: SMb20156
Funciton: putative ABC transporter ATP-binding protein
Locus tag: SMb20157
Name: SMb20158
Funciton: hypothetical ABC transporter periplasmic solute-binding protein
Locus tag: SMb20158
Name: SMb20158
Funciton: hypothetical ABC transporter periplasmic solute-binding protein
Locus tag: SMb20159
Name: PF00459
Funciton: Inositol monophosphatase
SMb20155
putative ABC transporter permease protein
SMb20156
putative ABC transporter ATP-binding protein
SMb20158
hypothetical ABC transporter periplasmic solute-binding protein
SMb20158
hypothetical ABC transporter periplasmic solute-binding protein
PF00459
Inositol monophosphatase

Position: -232
Score: 5.7
Sequence: AAATGCACACGTGAGCAATC
Position: -180
Score: 5.5
Sequence: ATACGCACACGTGTTCAGTT
Locus tag: SMb20154
Name: pRL90265
Funciton: Transcriptional regulator, LacI family
pRL90265
Transcriptional regulator, LacI family

Position: -52
Score: 5.9
Sequence: CGATGAACACGTGTGCAATA
Position: -34
Score: 5.6
Sequence: TATTGCGCGCGTGTGCAATG
Locus tag: SMb20150
Name: PF00459
Funciton: Inositol monophosphatase
Locus tag: SMb20151
Name: SSF52799
Funciton: Protein tyrosine phosphatase superfamily
Locus tag: SMb20152
Name: PF00149
Funciton: Metallo-dependent phosphatase
Locus tag: SMb20153
Name: COG1283
Funciton: Sodium-dependent phosphate transporter
PF00459
Inositol monophosphatase
SSF52799
Protein tyrosine phosphatase superfamily
PF00149
Metallo-dependent phosphatase
COG1283
Sodium-dependent phosphate transporter
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD