Regulon of pRL90265 in Sinorhizobium meliloti 1021
| Regulator type: | Transcription factor |
| TF locus tag: | SMb20154 |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Sugar utilization |
| Effector: | |
| Regulog: | pRL90265 - Rhizobiales |
| Statistics of regulated genes: | |
| - Genes | 10 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By TF family - LacI
- By pathway - Sugar utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -350
Score: 5.5 Sequence: AACTGAACACGTGTGCGTAT
Position: -298
Score: 5.7 Sequence: GATTGCTCACGTGTGCATTT
Locus tag: SMb20155
Name: SMb20155 Funciton: putative ABC transporter permease protein
Locus tag: SMb20156
Name: SMb20156 Funciton: putative ABC transporter ATP-binding protein
Locus tag: SMb20157
Name: SMb20158 Funciton: hypothetical ABC transporter periplasmic solute-binding protein
Locus tag: SMb20158
Name: SMb20158 Funciton: hypothetical ABC transporter periplasmic solute-binding protein
Locus tag: SMb20159
Name: PF00459 Funciton: Inositol monophosphatase |
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SMb20155
|
putative ABC transporter permease protein
|
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SMb20156
|
putative ABC transporter ATP-binding protein
|
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SMb20158
|
hypothetical ABC transporter periplasmic solute-binding protein
|
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SMb20158
|
hypothetical ABC transporter periplasmic solute-binding protein
|
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PF00459
|
Inositol monophosphatase
|
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Position: -232
Score: 5.7 Sequence: AAATGCACACGTGAGCAATC
Position: -180
Score: 5.5 Sequence: ATACGCACACGTGTTCAGTT
Locus tag: SMb20154
Name: pRL90265 Funciton: Transcriptional regulator, LacI family |
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pRL90265
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Transcriptional regulator, LacI family
|
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Position: -52
Score: 5.9 Sequence: CGATGAACACGTGTGCAATA
Position: -34
Score: 5.6 Sequence: TATTGCGCGCGTGTGCAATG
Locus tag: SMb20150
Name: PF00459 Funciton: Inositol monophosphatase
Locus tag: SMb20151
Name: SSF52799 Funciton: Protein tyrosine phosphatase superfamily
Locus tag: SMb20152
Name: PF00149 Funciton: Metallo-dependent phosphatase
Locus tag: SMb20153
Name: COG1283 Funciton: Sodium-dependent phosphate transporter |
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PF00459
|
Inositol monophosphatase
|
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SSF52799
|
Protein tyrosine phosphatase superfamily
|
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PF00149
|
Metallo-dependent phosphatase
|
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|
COG1283
|
Sodium-dependent phosphate transporter
|
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |