Regulon of XylR in Rhizobium leguminosarum bv. viciae 3841
| Regulator type: | Transcription factor |
| TF locus tag: | RL4178 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Xylose utilization |
| Effector: | Xylose |
| Regulog: | XylR - Rhizobiales |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By TF family - LacI
- By effector - Xylose
- By pathway - Xylose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -72
Score: 5.2 Sequence: AATGATGCACGTACGTCAGT
Locus tag: RL1519
Name: COG5001 Funciton: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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COG5001
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Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain
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Position: -50
Score: 6 Sequence: TGTGATGTACGTACAGCAAA
Locus tag: RL2788
Name: xynA Funciton: Beta-xylosidase (EC 3.2.1.37) |
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xynA
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Beta-xylosidase (EC 3.2.1.37)
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Position: -115
Score: 6.2 Sequence: TCTGAGGTACGTACATCATA
Locus tag: RL1181
Name: COG3576 Funciton: Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase |
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COG3576
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Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase
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Position: -48
Score: 6.6 Sequence: TTTGATTTACGTACATCAAA
Locus tag: RL4178
Name: xylR Funciton: Transcriptional regulator for xylose utilization, LacI family
Locus tag: RL4177
Name: xylB Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: RL4176
Name: xylA Funciton: Xylose isomerase (EC 5.3.1.5) |
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xylR
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Transcriptional regulator for xylose utilization, LacI family
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xylB
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Xylulose kinase (EC 2.7.1.17)
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xylA
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Xylose isomerase (EC 5.3.1.5)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |