Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of XylR in Rhizobium etli CFN 42

Properties
Regulator type: Transcription factor
TF locus tag: RHE_CH03650
Regulator family: LacI
Regulation mode: repressor
Biological process: Xylose utilization
Effector: Xylose
Regulog: XylR - Rhizobiales
Statistics of regulated genes:
- Genes 5
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 17 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -41
Score: 6.4
Sequence: TTTGATGTACGTACCTCAAC
Locus tag: RHE_CH02453
Name: xynA
Funciton: Beta-xylosidase (EC 3.2.1.37)
xynA
Beta-xylosidase (EC 3.2.1.37)

Position: -63
Score: 5.9
Sequence: TTTGAGGTACGTCCATCAGA
Locus tag: RHE_CH01398
Name: COG5001
Funciton: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain
COG5001
Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain

Position: -51
Score: 6.6
Sequence: TTTGATTTACGTACATCAAA
Locus tag: RHE_CH03650
Name: xylR
Funciton: Transcriptional regulator for xylose utilization, LacI family
Locus tag: RHE_CH03649
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: RHE_CH03648
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
xylR
Transcriptional regulator for xylose utilization, LacI family
xylB
Xylulose kinase (EC 2.7.1.17)
xylA
Xylose isomerase (EC 5.3.1.5)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD