Regulon of XylR in Agrobacterium tumefaciens str. C58 (Cereon)

Properties
Regulator type:	Transcription factor
TF locus tag:	Atu4481
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Xylose utilization
Effector:	Xylose
Regulog:	XylR - Rhizobiales
Statistics of regulated genes:
- Genes	6
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 17 sites [see more]

Member of regulog collections

By taxonomy - Rhizobiales
By TF family - LacI
By effector - Xylose
By pathway - Xylose utilization

Regulated operons
	Locus Tag	Name	Function
Position: -104 Score: 6.5 Sequence: TTTGAGGTACGTACCTCAAT Locus tag: Atu4480 Name: COG3576 Funciton: Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase
	Atu4480	COG3576	Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase
Position: -72 Score: 6.3 Sequence: TATGAGGTACGTACATCATT Locus tag: Atu4481 Name: xylR Funciton: Transcriptional regulator for xylose utilization, LacI family Locus tag: Atu4482 Name: xylB Funciton: Xylulose kinase (EC 2.7.1.17)
	Atu4481	xylR	Transcriptional regulator for xylose utilization, LacI family
	Atu4482	xylB	Xylulose kinase (EC 2.7.1.17)
Position: -129 Score: 6.2 Sequence: ATTGCTTTACGTACCTCAAA Locus tag: Atu3200 Name: null Funciton: ABC transporter, nucleotide binding/ATPase protein (ribose) Locus tag: Atu3199 Name: Atu3199 Funciton: ABC transporter, membrane spanning protein Locus tag: Atu3198 Name: null Funciton: ABC transporter, substrate binding protein
	Atu3200		ABC transporter, nucleotide binding/ATPase protein (ribose)
	Atu3199	Atu3199	ABC transporter, membrane spanning protein
	Atu3198		ABC transporter, substrate binding protein

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