Regulon of FadR in Shewanella woodyi ATCC 51908

Properties
Regulator type:	Transcription factor
TF locus tag:	Swoo_2689
Regulator family:	GntR/Others
Regulation mode:	repressor (activator)
Biological process:	Fatty acid degradation
Effector:	Palmitoyl-CoA; Oleoyl-CoA
Regulog:	FadR - Shewanellaceae
Statistics of regulated genes:
- Genes	7
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 101 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - FadR
By TF family - GntR/Others
By effector - Palmitoyl-CoA
By effector - Oleoyl-CoA
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -111 Score: 4.8 Sequence: TACTGGACAGACCAGTT Locus tag: Swoo_0090 Name: SO4716 Funciton: Acetyltransferase, GNAT family
	Swoo_0090	SO4716	Acetyltransferase, GNAT family
Position: -116 Score: 5.2 Sequence: TAATGGTCAGACCTGTT Locus tag: Swoo_3027 Name: fadI Funciton: FadI component of anaerobic fatty acid oxidation complex Locus tag: Swoo_3026 Name: fadJ Funciton: FadJ component of anaerobic fatty acid oxidation complex
	Swoo_3027	fadI	FadI component of anaerobic fatty acid oxidation complex
	Swoo_3026	fadJ	FadJ component of anaerobic fatty acid oxidation complex
Position: 45 Score: 4.3 Sequence: ttCTGGaCTGACCAGTg Locus tag: Swoo_4327 Name: SO0572 Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
	Swoo_4327	SO0572	Enoyl-CoA hydratase (EC 4.2.1.17)
Position: -127 Score: 4.6 Sequence: ATCTGGTCGGAGTTGTT Locus tag: Swoo_3037 Name: fadL Funciton: Long-chain fatty acid transport protein
	Swoo_3037	fadL	Long-chain fatty acid transport protein
Position: -55 Score: 3.4 Sequence: CTCTGGTATGATCAGTG Locus tag: Swoo_2689 Name: fadR Funciton: Transcriptional regulator for fatty acid degradation FadR, GntR family
	Swoo_2689	fadR	Transcriptional regulator for fatty acid degradation FadR, GntR family
Position: -95 Score: 4.2 Sequence: CACAGGTCTGACCACAA Locus tag: Swoo_2604 Name: fadE Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	Swoo_2604	fadE	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD