Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator FadR in Shewanellaceae

Properties
Regulator family: GntR/Others
Regulation mode: repressor (activator)
Biological process: Fatty acid degradation
Effector: Palmitoyl-CoA; Oleoyl-CoA
Regulog: FadR - Shewanellaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Shewanella oneidensis MR-1
SO_3099 fadL -196 4.8 ATCTGGCCAGACCATTC
SO_3099 fadL -125 5.1 ATCTGGTCGGACTTGTT
SO_3089 fadI -109 5.2 TAATGGTCAGACCTGTT
SO_4716 SO4716 -92 5.3 AACTGGCCAGACCTGTT
SO2885 fadR -54 3.4 CTCTGGTATGATCAGTG
SO2536 fadE -94 4.2 CACAGGTCTGACCACAA
SO0572 SO0572 -29 4.7 ATCTGGACTGACCAGTA
Shewanella putrefaciens CN-32
Sputcn32_2470 fadL -187 4.8 GTCTGGCCAGACCATTT
Sputcn32_2470 fadL -104 5.1 ATCTGGTCGGACTTGTT
Sputcn32_2460 fadI -114 5.2 TAATGGTCAGACCTGTT
Sputcn32_3876 SO4716 -92 5.3 AACTGGCCAGACCTGTT
Sputcn32_3304 SO0572 -29 4.5 TTCTGGACTGACCAGTA
Sputcn32_1683 fadR -53 3.4 CTCTGGTATGATCAGTG
Sputcn32_1791 fadE -94 4.2 CACAGGTCTGACCACAA
Shewanella sp W3-18-1
Sputw3181_1538 fadL -187 4.8 GTCTGGCCAGACCATTT
Sputw3181_1538 fadL -104 5.1 ATCTGGTCGGACTTGTT
Sputw3181_1548 fadI -114 5.2 TAATGGTCAGACCTGTT
Sputw3181_0077 SO4716 -92 5.3 AACTGGCCAGACCTGTT
Sputw3181_0637 SO0572 -29 4.5 TTCTGGACTGACCAGTA
Sputw3181_2342 fadR -26 3.4 CTCTGGTATGATCAGTG
Sputw3181_2234 fadE -94 4.2 CACAGGTCTGACCACAA
Shewanella sp ANA-3
Shewana3_1450 fadL -196 4.8 ATCTGGCCCGACCATTC
Shewana3_1450 fadL -125 5.1 ATCTGGTCGGACTTGTT
Shewana3_1460 fadI -113 5.2 TAATGGTCAGACCTGTT
Shewana3_4074 SO4716 -92 5.3 AACTGGCCAGACCTGTT
Shewana3_0572 SO0572 -29 4.9 TTCTGGCCTGACCAGTA
Shewana3_1635 fadR -53 3.4 CTCTGGTATGATCAGTG
Shewana3_2323 fadE -94 4.2 CACAGGTCAGACCACAA
Shewanella sp MR-4
Shewmr4_1397 fadL -196 4.8 ATCTGGCCAGACCATTC
Shewmr4_1397 fadL -125 5.1 ATCTGGTCGGACTTGTT
Shewmr4_1407 fadI -113 5.2 TAATGGTCAGACCTGTT
Shewmr4_3871 SO4716 -92 5.3 AACTGGCCAGACCTGTT
Shewmr4_0573 SO0572 -29 4.9 TTCTGGCCTGACCAGTA
Shewmr4_1568 fadR -53 3.4 CTCTGGTATGATCAGTG
Shewmr4_2146 fadE -94 4.2 CACAGGTCAGACCACAA
Shewanella sp MR-7
Shewmr7_1462 fadL -196 4.8 ATCTGGCCAGACCATTC
Shewmr7_1462 fadL -125 5.1 ATCTGGTCGGACTTGTT
Shewmr7_1472 fadI -113 5.2 TAATGGTCAGACCTGTT
Shewmr7_3964 SO4716 -92 5.3 AACTGGCCAGACCTGTT
Shewmr7_3457 SO0572 -29 4.9 TTCTGGCCTGACCAGTA
Shewmr7_1643 fadR -53 3.4 CTCTGGTATGATCAGTG
Shewmr7_2223 fadE -94 4.2 CACAGGTCAGACCACAA
Shewanella baltica OS155
Sbal_2771 fadL -211 4.8 ATCTGGCCAGACCATTC
Sbal_2771 fadL -129 5.1 ATCTGGTCGGACTTGTT
Sbal_2761 fadI -114 5.2 TAATGGTCAGACCTGTT
Sbal_0085 SO4716 -93 5.3 AACTGGCCAGACCTGTT
Sbal_0533 SO0572 -29 4.5 TTCTGGACTGACCAGTA
Sbal_1778 fadR -53 3.4 CTCTGGTATGATCAGTG
Sbal_2306 fadE -94 4.2 CACAGGTCTGACCACAA
Shewanella denitrificans OS217
Sden_1414 fadL -76 4.8 AACTGGTCGGAGTTGTT
Sden_1529 fadI -88 4.7 TGATGGTCAGACCAGAA
Sden_1635 fadR -47 3.5 CTCTGGTATGATCAGTC
Sden_1764 fadE -88 3.5 CACAGGTCTGACCACGG
Sden_0534 SO0572 -29 4.8 AACTGGACTGACCAGTA
Shewanella frigidimarina NCIMB 400
Sfri_2687 fadL -117 4.6 ATCTGGTCGGAGTTGTT
Sfri_2677 fadI -82 4.9 TGATGGTCTGACCAGAT
Sfri_3510 SO0572 -29 4.6 AACTGGACTGACCAGCA
Sfri_1743 fadR -59 3.5 CTCTGGTATGATCAGTC
Sfri_1869 fadE -88 3.7 CACAGGTCTGACCACGC
Shewanella amazonensis SB2B
Sama_2178 fadL -190 4.7 AACTGGCCCGGCCAGAC
Sama_2178 fadL -85 4.7 CTCTGGTCGGACTTGTT
Sama_2168 fadI -89 5.2 TAATGGTCAGACCTGTT
Sama_0127 SO4716 -78 5.3 AACTGGCCAGACCTGTT
Sama_1924 fadR -53 3.4 CTCTGGTATGATCAGTG
Sama_1870 fadE -86 4.1 CACAGGTCTGACCACAC
Sama_3135 SO0572 -27 4.7 TTCTGGACAGACCAGTT
Shewanella loihica PV-4
Shew_2436 fadL -133 4.6 ATCTGGTCGGAGTTGTT
Shew_2426 fadI -112 4.9 TGATGGTCTGACCTGTT
Shew_3680 SO4716 -91 5.4 AACTGGCCTGACCAGTT
Shew_2174 fadR -54 3.8 CTCTGGTATGATCAGTT
Shew_2108 fadE -93 4.7 CACAGGTCTGACCAGCA
Shew_0454 SO0572 -52 4.5 TTCTGGACTGACCAGTA
Shewanella pealeana ATCC 700345
Spea_2609 fadL -118 4.5 TTCTGGTCGGAGTTGTT
Spea_2599 fadI -94 4.9 TAATGGTCAGACCTGTC
Spea_4091 SO4716 -101 4.9 AACTGGACTGACCTGTT
Spea_2438 fadR -52 3.4 CTCTGGTATGATCTGTC
Spea_2393 fadE -92 4 CACAGGTCTGACCACAG
Spea_3709 SO0572 -36 4.1 TTCTGGACAGACCACTT
Shewanella halifaxensis HAW-EB4
Shal_2681 fadL -39 4.5 TTCTGGTCGGAGTTGTT
Shal_2671 fadI -97 5.2 TAATGGTCAGACCTGTT
Shal_0152 SO4716 -107 4.9 AACTGGACTGACCTGTT
Shal_1842 fadR -52 3.5 CTCTGGTATGATCTGTA
Shal_1890 fadE -92 4.1 CACAGGTCTGACCACAC
Shal_3794 SO0572 -35 4 GTCTGGACAGACCACTT
Shewanella piezotolerans WP3
swp_3153 fadL -116 4.2 CTCTGGTCGGAGTTGTT
swp_3140 fadI -100 5.2 TAATGGTCAGACCTGTT
swp_4975 SO4716 -265 4.9 AACTGGACAGACCTGTT
swp_2785 fadR -142 3.6 CTCTGGTATGATCAGTA
swp_2312 fadE -119 4 CACAGGTCTGACCACAG
swp_0563 SO0572 -37 4.7 ATCTGGACTGACCAGTA
Shewanella sediminis HAW-EB3
Ssed_1618 fadL -126 4.4 GTCTGGTCGGAGTTGTT
Ssed_1628 fadI -129 4.9 TGATGGTCAGACCTGTT
Ssed_2512 fadR -55 3.4 CTCTGGTATGATCAGTG
Ssed_1999 fadE -93 4.2 CACAGGTCTGACCACAA
Ssed_0623 SO0572 -34 4.5 CTCTGGACAGACCAGTT
Shewanella woodyi ATCC 51908
Swoo_3037 fadL -127 4.6 ATCTGGTCGGAGTTGTT
Swoo_3027 fadI -116 5.2 TAATGGTCAGACCTGTT
Swoo_4327 SO0572 45 4.3 ttCTGGaCTGACCAGTg
Swoo_0090 SO4716 -111 4.8 TACTGGACAGACCAGTT
Swoo_2689 fadR -55 3.4 CTCTGGTATGATCAGTG
Swoo_2604 fadE -95 4.2 CACAGGTCTGACCACAA
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