Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of FadR in Shewanella halifaxensis HAW-EB4

Properties
Regulator type: Transcription factor
TF locus tag: Shal_1842
Regulator family: GntR/Others
Regulation mode: repressor (activator)
Biological process: Fatty acid degradation
Effector: Palmitoyl-CoA; Oleoyl-CoA
Regulog: FadR - Shewanellaceae
Statistics of regulated genes:
- Genes 7
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 101 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -107
Score: 4.9
Sequence: AACTGGACTGACCTGTT
Locus tag: Shal_0152
Name: SO4716
Funciton: Acetyltransferase, GNAT family
SO4716
Acetyltransferase, GNAT family

Position: -97
Score: 5.2
Sequence: TAATGGTCAGACCTGTT
Locus tag: Shal_2671
Name: fadI
Funciton: FadI component of anaerobic fatty acid oxidation complex
Locus tag: Shal_2670
Name: fadJ
Funciton: FadJ component of anaerobic fatty acid oxidation complex
fadI
FadI component of anaerobic fatty acid oxidation complex
fadJ
FadJ component of anaerobic fatty acid oxidation complex

Position: -39
Score: 4.5
Sequence: TTCTGGTCGGAGTTGTT
Locus tag: Shal_2681
Name: fadL
Funciton: Long-chain fatty acid transport protein
fadL
Long-chain fatty acid transport protein

Position: -35
Score: 4
Sequence: GTCTGGACAGACCACTT
Locus tag: Shal_3794
Name: SO0572
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
SO0572
Enoyl-CoA hydratase (EC 4.2.1.17)

Position: -52
Score: 3.5
Sequence: CTCTGGTATGATCTGTA
Locus tag: Shal_1842
Name: fadR
Funciton: Transcriptional regulator for fatty acid degradation FadR, GntR family
fadR
Transcriptional regulator for fatty acid degradation FadR, GntR family

Position: -92
Score: 4.1
Sequence: CACAGGTCTGACCACAC
Locus tag: Shal_1890
Name: fadE
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
fadE
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD