Regulon of FadR in Shewanella piezotolerans WP3

Properties
Regulator type:	Transcription factor
TF locus tag:	swp_2785
Regulator family:	GntR/Others
Regulation mode:	repressor (activator)
Biological process:	Fatty acid degradation
Effector:	Palmitoyl-CoA; Oleoyl-CoA
Regulog:	FadR - Shewanellaceae
Statistics of regulated genes:
- Genes	7
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 101 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - FadR
By TF family - GntR/Others
By effector - Palmitoyl-CoA
By effector - Oleoyl-CoA
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -100 Score: 5.2 Sequence: TAATGGTCAGACCTGTT Locus tag: swp_3140 Name: fadI Funciton: FadI component of anaerobic fatty acid oxidation complex Locus tag: swp_3139 Name: fadJ Funciton: FadJ component of anaerobic fatty acid oxidation complex
	swp_3140	fadI	FadI component of anaerobic fatty acid oxidation complex
	swp_3139	fadJ	FadJ component of anaerobic fatty acid oxidation complex
Position: -116 Score: 4.2 Sequence: CTCTGGTCGGAGTTGTT Locus tag: swp_3153 Name: fadL Funciton: Long-chain fatty acid transport protein
	swp_3153	fadL	Long-chain fatty acid transport protein
Position: -265 Score: 4.9 Sequence: AACTGGACAGACCTGTT Locus tag: swp_4975 Name: SO4716 Funciton: Acetyltransferase, GNAT family
	swp_4975	SO4716	Acetyltransferase, GNAT family
Position: -37 Score: 4.7 Sequence: ATCTGGACTGACCAGTA Locus tag: swp_0563 Name: SO0572 Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
	swp_0563	SO0572	Enoyl-CoA hydratase (EC 4.2.1.17)
Position: -142 Score: 3.6 Sequence: CTCTGGTATGATCAGTA Locus tag: swp_2785 Name: fadR Funciton: Transcriptional regulator for fatty acid degradation FadR, GntR family
	swp_2785	fadR	Transcriptional regulator for fatty acid degradation FadR, GntR family
Position: -119 Score: 4 Sequence: CACAGGTCTGACCACAG Locus tag: swp_2312 Name: fadE Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	swp_2312	fadE	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD