Regulon of FadR in Shewanella pealeana ATCC 700345

Properties
Regulator type:	Transcription factor
TF locus tag:	Spea_2438
Regulator family:	GntR/Others
Regulation mode:	repressor (activator)
Biological process:	Fatty acid degradation
Effector:	Palmitoyl-CoA; Oleoyl-CoA
Regulog:	FadR - Shewanellaceae
Statistics of regulated genes:
- Genes	7
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 101 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - FadR
By TF family - GntR/Others
By effector - Palmitoyl-CoA
By effector - Oleoyl-CoA
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -101 Score: 4.9 Sequence: AACTGGACTGACCTGTT Locus tag: Spea_4091 Name: SO4716 Funciton: Acetyltransferase, GNAT family
	Spea_4091	SO4716	Acetyltransferase, GNAT family
Position: -94 Score: 4.9 Sequence: TAATGGTCAGACCTGTC Locus tag: Spea_2599 Name: fadI Funciton: FadI component of anaerobic fatty acid oxidation complex Locus tag: Spea_2598 Name: fadJ Funciton: FadJ component of anaerobic fatty acid oxidation complex
	Spea_2599	fadI	FadI component of anaerobic fatty acid oxidation complex
	Spea_2598	fadJ	FadJ component of anaerobic fatty acid oxidation complex
Position: -118 Score: 4.5 Sequence: TTCTGGTCGGAGTTGTT Locus tag: Spea_2609 Name: fadL Funciton: Long-chain fatty acid transport protein
	Spea_2609	fadL	Long-chain fatty acid transport protein
Position: -36 Score: 4.1 Sequence: TTCTGGACAGACCACTT Locus tag: Spea_3709 Name: SO0572 Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
	Spea_3709	SO0572	Enoyl-CoA hydratase (EC 4.2.1.17)
Position: -52 Score: 3.4 Sequence: CTCTGGTATGATCTGTC Locus tag: Spea_2438 Name: fadR Funciton: Transcriptional regulator for fatty acid degradation FadR, GntR family
	Spea_2438	fadR	Transcriptional regulator for fatty acid degradation FadR, GntR family
Position: -92 Score: 4 Sequence: CACAGGTCTGACCACAG Locus tag: Spea_2393 Name: fadE Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	Spea_2393	fadE	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD