Regulon of FadR in Shewanella amazonensis SB2B

Properties
Regulator type:	Transcription factor
TF locus tag:	Sama_1924
Regulator family:	GntR/Others
Regulation mode:	repressor (activator)
Biological process:	Fatty acid degradation
Effector:	Palmitoyl-CoA; Oleoyl-CoA
Regulog:	FadR - Shewanellaceae
Statistics of regulated genes:
- Genes	7
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 101 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - FadR
By TF family - GntR/Others
By effector - Palmitoyl-CoA
By effector - Oleoyl-CoA
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -78 Score: 5.3 Sequence: AACTGGCCAGACCTGTT Locus tag: Sama_0127 Name: SO4716 Funciton: Acetyltransferase, GNAT family
	Sama_0127	SO4716	Acetyltransferase, GNAT family
Position: -190 Score: 4.7 Sequence: AACTGGCCCGGCCAGAC Position: -85 Score: 4.7 Sequence: CTCTGGTCGGACTTGTT Locus tag: Sama_2178 Name: fadL Funciton: Long-chain fatty acid transport protein
	Sama_2178	fadL	Long-chain fatty acid transport protein
Position: -89 Score: 5.2 Sequence: TAATGGTCAGACCTGTT Locus tag: Sama_2168 Name: fadI Funciton: FadI component of anaerobic fatty acid oxidation complex Locus tag: Sama_2167 Name: fadJ Funciton: FadJ component of anaerobic fatty acid oxidation complex
	Sama_2168	fadI	FadI component of anaerobic fatty acid oxidation complex
	Sama_2167	fadJ	FadJ component of anaerobic fatty acid oxidation complex
Position: -27 Score: 4.7 Sequence: TTCTGGACAGACCAGTT Locus tag: Sama_3135 Name: SO0572 Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
	Sama_3135	SO0572	Enoyl-CoA hydratase (EC 4.2.1.17)
Position: -86 Score: 4.1 Sequence: CACAGGTCTGACCACAC Locus tag: Sama_1870 Name: fadE Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	Sama_1870	fadE	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -53 Score: 3.4 Sequence: CTCTGGTATGATCAGTG Locus tag: Sama_1924 Name: fadR Funciton: Transcriptional regulator for fatty acid degradation FadR, GntR family
	Sama_1924	fadR	Transcriptional regulator for fatty acid degradation FadR, GntR family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD