Regulon of AfrR in Jannaschia sp. CCS1
| Regulator type: | Transcription factor |
| TF locus tag: | Jann_3927 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | 1,5-Anhydro-d-Fructose utilization |
| Effector: | |
| Regulog: | AfrR - Rhodobacterales |
| Statistics of regulated genes: | |
| - Genes | 12 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By TF family - LacI
- By pathway - 1,5-Anhydro-d-Fructose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -58
Score: 5.5 Sequence: ATTGTGGAACGTTCCAATTA
Position: -33
Score: 5.8 Sequence: AAATCGGAACGTTCCAATTT
Locus tag: Jann_3940
Name: afr Funciton: 1,5-anhydro-D-fructose reductase EC=1.1.1.292
Locus tag: Jann_3939
Name: null Funciton: coenzyme A transferase
Locus tag: Jann_3938
Name: null Funciton: enoyl-CoA hydratase
Locus tag: Jann_3937
Name: null Funciton: Betaine-aldehyde dehydrogenase EC=1.2.1.- |
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afr
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1,5-anhydro-D-fructose reductase EC=1.1.1.292
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coenzyme A transferase
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enoyl-CoA hydratase
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Betaine-aldehyde dehydrogenase EC=1.2.1.-
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Position: -35
Score: 5.4 Sequence: GAATTGGAACGTTCCAGAAG
Locus tag: Jann_3931
Name: null Funciton: FAD dependent oxidoreductase
Locus tag: Jann_3930
Name: null Funciton: short-chain dehydrogenase/reductase SDR
Locus tag: Jann_3929
Name: sdh Funciton: L-sorbose 1-dehydrogenase EC=1.1.99.32
Locus tag: Jann_3928
Name: null Funciton: hypothetical protein
Locus tag: Jann_3927
Name: afrR Funciton: Transcriptional regulator for 1,5-Anhydro-d-Fructose utilization, LacI family
Locus tag: Jann_3926
Name: null Funciton: Hydroxypyruvate reductase
Locus tag: Jann_3925
Name: null Funciton: Stress responsive alpha-beta
Locus tag: Jann_3924
Name: null Funciton: hypothetical protein |
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FAD dependent oxidoreductase
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short-chain dehydrogenase/reductase SDR
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sdh
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L-sorbose 1-dehydrogenase EC=1.1.99.32
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hypothetical protein
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afrR
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Transcriptional regulator for 1,5-Anhydro-d-Fructose utilization, LacI family
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Hydroxypyruvate reductase
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Stress responsive alpha-beta
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hypothetical protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |