Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of FadR in Shewanella sp MR-4

Properties
Regulator type: Transcription factor
TF locus tag: Shewmr4_1568
Regulator family: GntR/Others
Regulation mode: repressor (activator)
Biological process: Fatty acid degradation
Effector: Palmitoyl-CoA; Oleoyl-CoA
Regulog: FadR - Shewanellaceae
Statistics of regulated genes:
- Genes 7
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 101 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -92
Score: 5.3
Sequence: AACTGGCCAGACCTGTT
Locus tag: Shewmr4_3871
Name: SO4716
Funciton: Acetyltransferase, GNAT family
SO4716
Acetyltransferase, GNAT family

Position: -113
Score: 5.2
Sequence: TAATGGTCAGACCTGTT
Locus tag: Shewmr4_1407
Name: fadI
Funciton: FadI component of anaerobic fatty acid oxidation complex
Locus tag: Shewmr4_1408
Name: fadJ
Funciton: FadJ component of anaerobic fatty acid oxidation complex
fadI
FadI component of anaerobic fatty acid oxidation complex
fadJ
FadJ component of anaerobic fatty acid oxidation complex

Position: -196
Score: 4.8
Sequence: ATCTGGCCAGACCATTC
Position: -125
Score: 5.1
Sequence: ATCTGGTCGGACTTGTT
Locus tag: Shewmr4_1397
Name: fadL
Funciton: Long-chain fatty acid transport protein
fadL
Long-chain fatty acid transport protein

Position: -29
Score: 4.9
Sequence: TTCTGGCCTGACCAGTA
Locus tag: Shewmr4_0573
Name: SO0572
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
SO0572
Enoyl-CoA hydratase (EC 4.2.1.17)

Position: -53
Score: 3.4
Sequence: CTCTGGTATGATCAGTG
Locus tag: Shewmr4_1568
Name: fadR
Funciton: Transcriptional regulator for fatty acid degradation FadR, GntR family
fadR
Transcriptional regulator for fatty acid degradation FadR, GntR family

Position: -94
Score: 4.2
Sequence: CACAGGTCAGACCACAA
Locus tag: Shewmr4_2146
Name: fadE
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
fadE
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD