Regulon of IolR in Silicibacter TM1040

Properties
Regulator type:	Transcription factor
TF locus tag:	TM1040_3344
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Inositol utilization
Effector:
Regulog:	IolR - Rhodobacterales
Statistics of regulated genes:
- Genes	12
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 13 sites [see more]

Member of regulog collections

By taxonomy - Rhodobacterales
By TF family - LacI
By pathway - Inositol utilization

Regulated operons
	Locus Tag	Name	Function
Position: -47 Score: 7.1 Sequence: TTTTGCAACCGGTTGCAAAC Locus tag: TM1040_3347 Name: null Funciton: oxidoreductase Locus tag: TM1040_3346 Name: iolE Funciton: myo-inositol catabolism protein Locus tag: TM1040_3345 Name: null Funciton: oxidoreductase
	TM1040_3347		oxidoreductase
	TM1040_3346	iolE	myo-inositol catabolism protein
	TM1040_3345		oxidoreductase
Position: -96 Score: 7.1 Sequence: GTTTGCAACCGGTTGCAAAA Locus tag: TM1040_3348 Name: iolD Funciton: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase Locus tag: TM1040_3349 Name: iolC Funciton: 5-keto-2-deoxygluconokinase (EC 2.7.1.92) Locus tag: TM1040_3350 Name: iolB Funciton: 5-deoxy-glucuronate isomerase (EC 5.3.1.-) Locus tag: TM1040_3351 Name: iolJ Funciton: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29) Locus tag: TM1040_3352 Name: iolG Funciton: Myo-inositol 2-dehydrogenase EC=1.1.1.18
	TM1040_3348	iolD	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase
	TM1040_3349	iolC	5-keto-2-deoxygluconokinase (EC 2.7.1.92)
	TM1040_3350	iolB	5-deoxy-glucuronate isomerase (EC 5.3.1.-)
	TM1040_3351	iolJ	5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29)
	TM1040_3352	iolG	Myo-inositol 2-dehydrogenase EC=1.1.1.18
Position: -100 Score: 7.1 Sequence: CTTTGCAACCGGTTGCAAAA Locus tag: TM1040_3344 Name: iolR Funciton: Transcriptional regulator of inositol utilization, LacI famil
	TM1040_3344	iolR	Transcriptional regulator of inositol utilization, LacI famil
Position: -216 Score: 4.9 Sequence: TTCTGCAACCTCTTTCAACG Position: -106 Score: 7.1 Sequence: TTTTGCAACCGGTTGCAAAG Locus tag: TM1040_3343 Name: iolK Funciton: Sugar ABC transporter, substrate-binding protein Locus tag: TM1040_3342 Name: iolL Funciton: Sugar ABC transporter, inner membrane protein Locus tag: TM1040_3341 Name: iolM Funciton: Sugar ABC transporter, ATP-binding protein
	TM1040_3343	iolK	Sugar ABC transporter, substrate-binding protein
	TM1040_3342	iolL	Sugar ABC transporter, inner membrane protein
	TM1040_3341	iolM	Sugar ABC transporter, ATP-binding protein

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