Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of IolR in Loktanella vestfoldensis SKA53

Properties
Regulator type: Transcription factor
TF locus tag: SKA53_08821
Regulator family: LacI
Regulation mode: repressor
Biological process: Inositol utilization
Effector:
Regulog: IolR - Rhodobacterales
Statistics of regulated genes:
- Genes 13
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 13 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -46
Score: 6.9
Sequence: TTTTGCAACCGGTTGCAACC
Locus tag: SKA53_08806
Name: null
Funciton: oxidoreductase
Locus tag: SKA53_08811
Name: iolE
Funciton: myo-inositol catabolism protein
Locus tag: SKA53_08816
Name: null
Funciton: oxidoreductase
oxidoreductase
iolE
myo-inositol catabolism protein
oxidoreductase

Position: -84
Score: 6.9
Sequence: GGTTGCAACCGGTTGCAAAA
Locus tag: SKA53_08801
Name: iolD
Funciton: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase
Locus tag: SKA53_08796
Name: iolC
Funciton: 5-keto-2-deoxygluconokinase (EC 2.7.1.92)
Locus tag: SKA53_08791
Name: iolB
Funciton: 5-deoxy-glucuronate isomerase (EC 5.3.1.-)
Locus tag: SKA53_08786
Name: iolJ
Funciton: 5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29)
Locus tag: SKA53_08781
Name: iolG
Funciton: Myo-inositol 2-dehydrogenase EC=1.1.1.18
iolD
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase
iolC
5-keto-2-deoxygluconokinase (EC 2.7.1.92)
iolB
5-deoxy-glucuronate isomerase (EC 5.3.1.-)
iolJ
5-keto-2-deoxy-D-gluconate-6 phosphate aldolase (EC 4.1.2.29)
iolG
Myo-inositol 2-dehydrogenase EC=1.1.1.18

Position: -95
Score: 6.7
Sequence: AATTGCAACCGGTTGCAAAA
Locus tag: SKA53_08821
Name: iolR
Funciton: Transcriptional regulator of inositol utilization, LacI famil
iolR
Transcriptional regulator of inositol utilization, LacI famil

Position: -111
Score: 6.7
Sequence: TTTTGCAACCGGTTGCAATT
Locus tag: SKA53_08826
Name: iolK
Funciton: Sugar ABC transporter, substrate-binding protein
Locus tag: SKA53_08831
Name: iolL
Funciton: Sugar ABC transporter, inner membrane protein
Locus tag: SKA53_08836
Name: iolM
Funciton: Sugar ABC transporter, ATP-binding protein
Locus tag: SKA53_08841
Name: iolB
Funciton: 5-deoxy-glucuronate isomerase (EC 5.3.1.-)
iolK
Sugar ABC transporter, substrate-binding protein
iolL
Sugar ABC transporter, inner membrane protein
iolM
Sugar ABC transporter, ATP-binding protein
iolB
5-deoxy-glucuronate isomerase (EC 5.3.1.-)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD